Colossal Biosciences Engineers Dire Wolves to Advance Wildlife Rescue

Bringing Extinct Species Back to Life | Dr. Beth Shapiro — Andrew Huberman

Andrew Huberman

Colossal Chief Science Officer Beth Shapiro argues that rejecting synthetic biology out of risk aversion guarantees biodiversity loss, requiring gene-editing tools built for de-extinction to actively rescue threatened ecosystems.

AI-assisted summary of Bringing Extinct Species Back to Life | Dr. Beth Shapiro — original source. Check the original for full context.

Source published:

Key ideas

  • De-extinction efforts are functionally indistinguishable from modern genetic rescue pipelines, using identical toolsets in sequencing, genome editing, and assisted reproduction to protect critically endangered species. (0:00)
  • Colossal Biosciences has produced three living engineered dire wolves—identical twins Romulus and Remus, and female Khaleesi—by introducing 20 targeted genetic edits into the gray wolf genome. (55:41)
  • DNA degrades completely well before 66 million years, making non-avian dinosaur revival physically impossible; the oldest recovered mammalian DNA spans roughly 1 to 2 million years. (30:17)
  • Synthetic biology can rapidly neutralize ecological threats, demonstrated by introducing a single point mutation into the northern quoll genome to confer in vitro resistance to invasive cane toad bufotoxin. (73:24)

Detailed notes

## Background Published on YouTube by Andrew Huberman on October 5, 2026, this episode features Dr. Beth Shapiro, evolutionary biologist and Chief Science Officer at Colossal Biosciences. The discussion covers how ancient DNA and modern reproductive technologies are being applied to de-extinction projects—including woolly mammoths, dodos, and dire wolves—alongside the technical pipelines, ethical questions, and synthetic biology tools aimed at bolstering endangered species conservation.

## TL;DR Dr. Beth Shapiro deconstructs classical taxonomy, explaining that species boundaries are pragmatic human constructs rather than rigid biological absolutes, as demonstrated by archaic hominin interbreeding and hybrid animals. She outlines Colossal Biosciences' de-extinction initiatives, explaining how targeted gene editing of living relatives enables the phenotypic revival of traits from woolly mammoths, dodos, and dire wolves without synthesizing extinct genomes from scratch. Shapiro emphasizes that the technologies underpinning de-extinction—including somatic cell nuclear transfer, multiplex editing, and artificial wombs—are dual-use tools critically needed to genetically rescue endangered wildlife like the northern quoll and black-footed ferret. Ultimately, the discussion reframes synthetic biology from an exercise in playing God to a proactive, necessary framework for human stewardship in an ecologically degraded world.

## Atmosphere & style The dialogue maintains a brisk, intellectually rigorous, and grounded tone, driven by Huberman's probing technical questions and Shapiro's pragmatic, myth-busting expertise. Shapiro cuts through science-fiction sensationalism with infectious enthusiasm and plainspoken academic realism, laughing off purist dogmas in favor of ecological function. The discussion feels less like a dry seminar and more like an urgent, behind-the-scenes strategy session for the future of biodiversity, leaving listeners both fascinated by ancient DNA forensics and challenged by the ethical realities of planetary stewardship.

## Bulletin - [00:00](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=0s) De-extinction efforts are functionally indistinguishable from modern genetic rescue pipelines, using identical toolsets in sequencing, genome editing, and assisted reproduction to protect critically endangered species. - [55:41](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=3341s) Colossal Biosciences has produced three living engineered dire wolves—identical twins Romulus and Remus, and female Khaleesi—by introducing 20 targeted genetic edits into the gray wolf genome. - [30:17](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=1817s) DNA degrades completely well before 66 million years, making non-avian dinosaur revival physically impossible; the oldest recovered mammalian DNA spans roughly 1 to 2 million years. - [01:13:24](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=4404s) Synthetic biology can rapidly neutralize ecological threats, demonstrated by introducing a single point mutation into the northern quoll genome to confer in vitro resistance to invasive cane toad bufotoxin.

## Key takeaways - [02:35](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=155s) Species definitions are human cognitive constructs rather than immutable natural laws, serving heuristic roles for legal protection, habitat management, and evolutionary study. - [09:19](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=559s) Modern non-African humans retain 2% to 5% Neanderthal DNA due to ancient interbreeding, with aggregated fragments allowing reconstruction of 90% to 95% of the Neanderthal genome. - [24:15](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=1455s) Genomic 'deserts' in humans lacking introgressed Neanderthal DNA reveal essential, human-defining adaptations where archaic variants were maladaptive or lethal. - [25:53](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=1553s) Ancient DNA preserved in human and pathogen remains highlights past selective sweeps, including immune adaptations to the Black Death and archaic alleles altering modern diabetes and COVID-19 risk. - [49:01](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=2941s) De-extinction focuses on engineering functional genomic divergence rather than assembling extinct genomes from scratch, targeting shared loci governing cold tolerance, morphology, and physiology. - [39:21](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=2361s) Avian de-extinction requires distinct synthetic biology pipelines because somatic cell nuclear transfer cannot be performed on bird eggs due to reproductive anatomy. - [57:42](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=3462s) Colossal's dire wolf project prioritizes animal welfare and ecological viability over exact sequence identity, avoiding risky ancestral variants linked to albinism and sensory deficits. - [01:09:14](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=4154s) Reintroducing apex predators or functional proxies can restore critical trophic cascades and naturally suppress transmissible wildlife diseases like Tasmanian devil facial tumor disease. - [01:20:58](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=4858s) Self-limiting gene drives offer a targeted mechanism to suppress disease vectors or invasive weeds like cheatgrass without causing permanent ecological collapse. - [01:23:44](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5024s) Historical genetic rescue, such as introducing Texas cougars to revive inbred Florida panthers, demonstrates that managed gene flow can rapidly reverse severe inbreeding depression. - [01:41:25](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=6085s) Channel Island foxes demonstrate that severe population bottlenecks can purge lethal recessive mutations, leaving an outwardly healthy population despite nearly nonexistent genetic diversity. - [01:44:09](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=6249s) Cloning using cryopreserved cell lines from repositories like the San Diego Frozen Zoo has successfully restored lost historical alleles to endangered black-footed ferret populations. - [01:54:31](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=6871s) Developing ex utero incubation and artificial wombs is essential for scaling mammoth revival without burdening endangered Asian elephant surrogates, offering parallel advances for human neonatal intensive care. - [01:57:38](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=7058s) High-visibility de-extinction candidates like mammoths and thylacines attract private venture capital and technological innovation into conservation biology that traditional funding streams fail to supply.

## Detailed walkthrough ### [00:00](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=0s) De-Extinction as an Engine for Conservation

The conversation opens directly with the mechanics of recreating extinct predators. Dr. Beth Shapiro explains that for their dire wolf project, scientists identified and selected 20 specific genetic edits after sequencing genomes recovered from fossil dire wolves. By analyzing these ancient sequences, researchers pinpointed the exact mutations responsible for the dire wolf’s hallmark traits—namely, an animal that was substantially larger, possessed a heavier, more robust bone structure, and sported a lighter-colored coat. The team then engineered these targeted edits directly into the genome of a modern gray wolf (*Canis lupus*) to resurrect the dire wolf phenotype.

Addressing a frequent critique of de-extinction, Shapiro confronts the question of why anyone should dedicate time and resources to resurrecting extinct creatures rather than safeguarding extant species on the brink of collapse. Her answer is straightforward: Colossal Biosciences is doing both simultaneously. The underlying genetic sequencing, gene-editing platforms, and reproductive technologies required to bring back a lost lineage are identical to the tools needed to perform genetic rescue on endangered animals. Flagship de-extinction candidates like woolly mammoths, dodos, and thylacines (Tasmanian tigers) capture public imagination in a way obscure endangered species rarely do, generating the broad engagement, public enthusiasm, and private capital necessary to build biotechnology that halts current extinction events.

```mermaid flowchart TD accTitle: Dire Wolf De-Extinction Process accDescr: Flowchart illustrating the steps from fossil sequencing to engineering a gray wolf genome. subgraph AncientGenomics["1. Genomic Discovery"] A["Fossil Dire Wolf Remains"] --> B["Sequence Ancient DNA"] B --> C["Identify Key Phenotypic Edits<br>(Larger frame, robust build, light coat)"] end subgraph Engineering["2. Genetic Engineering"] C --> D["Select 20 Target Edits"] D --> E["Introduce Edits into Gray Wolf Genome"] end subgraph DeExtinction["3. De-Extinction & Applied Conservation"] E --> F["Resurrected Dire Wolf Phenotype"] D -.->|"Dual-use technology"| G["Genetic Rescue for Living Species"] end ```

[00:52](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=52s) Introduction to Dr. Beth Shapiro and the Frontiers of Genomics

Andrew Huberman introduces Dr. Beth Shapiro, framing her career as an evolutionary biologist who transitioned from tenured academia as a professor at the University of California, Santa Cruz, and an investigator with the Howard Hughes Medical Institute (HHMI), to her current role as Chief Science Officer at Colossal Biosciences. While her public-facing work centers on reviving iconic creatures like the mammoth, dodo, and dire wolf, her broader scientific mandate addresses global biodiversity, ecosystem restoration, and the preservation of critically threatened species.

Huberman highlights that ancient DNA research and synthetic biology are fundamentally transforming our understanding of the tree of life, with implications extending directly into modern clinical genetics and human genetic modification. He clarifies that these developments are not speculative future scenarios, but active technologies being deployed today. He also dispels a popular pop-culture myth: Dr. Shapiro is not trying to bring back non-avian dinosaurs, a reality governed by the physical half-life and degradation limits of ancient nucleic acids. Following standard disclosures distinguishing the podcast from his institutional responsibilities at Stanford University School of Medicine, Huberman welcomes Shapiro to the studio.

[02:35](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=155s) The Illusion of Species and the Buffalo Taxonomy

Huberman launches into a fundamental puzzle of evolutionary biology: how scientists define what a "species" actually is, particularly now that high-throughput ancient and modern DNA sequencing has radically redrawn phylogenetic trees. He asks how morphological extremes within a single lineage—such as an English bulldog versus a Chihuahua—can legitimately be classified as the same organism, while other subtly distinct animals are split into separate categories. Shapiro responds by dismantling a widespread assumption about nature: "Biology doesn't care what species you are. Species is a human concept." Humans have an ingrained cognitive urge to categorize nature into distinct mental boxes so that they can communicate, trade information, and build shared social structures through language.

To demonstrate how arbitrary classical taxonomy can be, Shapiro shares an example from her extensive research career on bison. Historically, when early European explorers traversed the globe, they applied the label "buff" or "buffalo" to virtually any large, sturdy quadruped whose hide produced a thick, durable coat (a "buff coat"). As a consequence, animals bearing radically divergent evolutionary histories—such as the African buffalo (*Syncerus caffer*), the Asian water buffalo (*Bubalus bubalis*), and the North American bison—were all lumped together as "buffalo," despite sharing little genetic kinship.

When Swedish botanist and taxonomist Carl Linnaeus developed modern binomial nomenclature to resolve this ambiguity, he designated the American bison as *Bison bison*. The plains subspecies was eventually dubbed *Bison bison bison*, repeating the exact same word across genus, species, and subspecies. Huberman and Shapiro joke about other redundant taxonomic classifications, such as the western gorilla (*Gorilla gorilla*) and the llama (*Lama glama*).

- European explorers assigned the term "buffalo" purely based on utility (suitability for making leather "buff coats"). - American bison, Asian water buffalo, and African cape buffalo are not closely related genetically despite sharing common names. - The plains bison possesses the threefold scientific name *Bison bison bison*.

[06:05](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=365s) Biological, Genetic, and Geographic Species Concepts

The discussion shifts to Ernst Mayr’s classic "biological species concept," traditionally taught in secondary school biology, which dictates that two organisms belong to the same species if they can mate and produce viable, fertile offspring. While Huberman notes this definition holds up well in classic model systems like *Drosophila* fruit flies—where distinct species generally do not hybridize, and animals exhibit behavioral barriers against mating with other taxa—Shapiro humorously counters that domestic dogs will attempt to mate with almost anything. This prompts a brief detour where Huberman discusses keeping his young dog intact to preserve sex steroid hormones vital for musculoskeletal and neural development, noting regional differences such as Scandinavian restrictions against non-medical surgical castration versus routine spaying and neutering in the United States and Australia.

Huberman then poses a provocative question: based on genetic sequencing thresholds, are Neanderthals and anatomically modern humans (*Homo sapiens*) different species, and could living human populations diverge enough genetically to challenge uniform species classifications? Shapiro explains that the biological species concept is merely one framework among many: - The **Biological Species Concept** (Ernst Mayr): Focuses on reproductive isolation and the ability to produce fertile offspring. - The **Genetic Species Concept**: Relies on specific empirical percentages of sequence divergence and nucleotide similarity across genomes. - The **Geographic Species Concept**: Categorizes populations according to habitat boundaries—such as distinguishing the Florida panther from the Texas cougar to establish conservation protections and allocate legal resources.

Shapiro emphasizes that none of these models represent an objective truth of the natural world. Instead, they are heuristic constructs adopted by scientists to facilitate specific conversations, whether managing ecological habitats, mapping deep evolutionary lineages, or studying historical gene flow between ancient hominins and modern humans.

[09:19](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=559s) Neanderthals, Denisovans, and Ancient Admixture

Beth Shapiro explains that her husband, Ed Green, worked directly with Svante Pääbo’s research group when they first assembled the Neanderthal genome. By studying ancient DNA retrieved from ancient remains, researchers have uncovered an increasingly complex picture of human ancestry. Pääbo's team identified another distinct human lineage, the Denisovans, through DNA recovered from a solitary, tiny finger bone found in Denisova Cave in Siberia, Russia. These discoveries established that multiple hominin lineages coexisted simultaneously. When anatomically modern humans (*Homo sapiens*) expanded out of Africa and moved into Europe and Asia, they encountered and bred with Neanderthals and Denisovans.

Under the strict biological species concept, two groups that produce fertile offspring belong to the same species; the fact that humans and Neanderthals interbred underscores that species concepts are arbitrary human categories rather than rigid natural laws. As a result of these ancient admixture and hybridization events, modern humans outside of sub-Saharan Africa carry approximately 2% to 5% Neanderthal DNA in their genomes today.

- Ed Green co-led the initial assembly of the Neanderthal draft genome in Svante Pääbo's laboratory. - Denisovans were discovered from a single pinky bone fragment excavated in Denisova Cave, Russia. - Admixture occurred when modern humans migrated out of Africa into Europe and Asia. - Most present-day non-African humans retain roughly 2% to 5% Neanderthal ancestry.

```mermaid flowchart TD accTitle: Ancient Human Migration and Admixture accDescr: Modern humans migrating out of Africa interbred with Neanderthals in Europe and Denisovans in Asia. subgraph Lineages["Hominin Lineages"] A["Homo sapiens<br/>(Modern Humans, Africa)"] N["Neanderthals<br/>(Eurasia)"] D["Denisovans<br/>(Siberia / Asia)"] end subgraph Contact["Admixture Events"] A -->|"Migration into Europe"| N A -->|"Migration into Asia"| D end N --> M["Modern Non-African Humans<br/>(2–5% Neanderthal DNA)"] D --> M ```

[10:48](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=648s) The Fossil Record vs. Ancient DNA in Paleoanthropology

Andrew Huberman asks about the iconic silhouette chart showing an ape progressively standing up into a bipedal human, asking whether that tidy progression is truly corroborated by fossils. Shapiro explains that while the general lineage tracing from primates to apes and eventually to bipeds in Africa is well established, the underlying African fossil record is extremely sparse and fragmentary.

Because skeletal evidence is so scarce, paleoanthropology has historically been contentious: a newly uncovered fragment of a jaw with a partial tooth can prompt researchers to drastically overhaul existing evolutionary trees. Shapiro highlights the profound difference ancient DNA makes: - Morphologists finding an isolated fossil cannot definitively tell whether that individual left any living descendants or was merely an evolutionary dead end. - Ancient DNA allows scientists to sequence a bone directly and map it against the genomes of living people, identifying direct genetic contributions and hybridization events. - Because these related lineages retained reproductive compatibility, they interbred when ranges overlapped: "if they can, they do."

[12:38](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=758s) Sponsor Break: Joovv & Eight Sleep

Huberman presents messages from two sponsors: - **Joovv**: Provides medical-grade red, near-infrared, and infrared light therapy panels. Light triggers cellular adaptations that aid muscle recovery, reduce pain and inflammation, support mitochondrial function, and assist skin repair and vision. Huberman describes using the whole-body panel three to four times a week for 10–20 minutes, alongside a portable handheld unit. - **Eight Sleep**: Highlights the Pod 6 smart mattress cover, featuring sleep tracking alongside cooling and heating. Core body temperature must drop by 1° to 3°F to initiate deep sleep and must rise toward waking; the Pod 6 adjusts dynamically to facilitate deep and REM sleep.

[15:27](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=927s) Hybridization, Speciation, and "Grolar" Bears

Huberman asks whether extreme morphological differences preclude hybridization and how populations bridge the gap from quadrupedal primates to bipedal hominins without spontaneous mass mutations. Shapiro emphasizes that evolution is a slow, gradual accumulation of random mutations shaped by natural selection and genetic drift.

When two populations diverge geographically into disparate environments (such as a wet, lush floral habitat versus a dry scrubland), natural selection fixes different mutations in each group. In small populations, mutations—even mildly deleterious ones—can become fixed purely by chance through drift. When these isolated populations meet again, hybridization viability depends on which specific mutations accumulated: - Some lineages diverge for a brief period yet rapidly evolve biological barriers, such as sperm unable to fertilize an egg or zygotes failing to cleave properly. - Other lineages separate for vast spans of evolutionary time without acquiring reproductive incompatibilities, allowing extensive admixture upon reunion.

To illustrate, Shapiro notes that modern humans and Neanderthals diverged roughly 300,000 to 500,000 years ago—a relatively brief window in evolutionary terms. Similarly, brown bears (*Ursus arctos*) and polar bears (*Ursus maritimus*) diverged around 500,000 years ago and hybridize readily wherever their territories overlap, producing hybrids known colloquially as "grolar bears" or "pizzly bears." Ancient DNA has shown that this cross-breeding is an ongoing dynamic across hundreds of thousands of years: - An ancient Alaskan polar bear specimen over 100,000 years old shares ancestral DNA found in brown bears across the globe. - During the last Ice Age, polar bears became stranded on the ABC Islands (Admiralty, Baranof, and Chichagof Islands) in Southeast Alaska; when brown bears expanded from the mainland, they interbred extensively with this isolated polar bear population.

[18:40](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=1120s) Directional Gene Flow in Bear Hybrids and Adaptive Survival

All brown bears alive in North America today carry polar bear ancestry tracing back to an interbreeding event approximately 20,000 years ago. Despite having diverged for roughly half a million years and evolving distinct adaptations to vastly different environments, brown bears and polar bears can successfully interbreed. Intriguingly, hybrid ancestry flows in only one direction: there is no evidence of brown bear DNA persisting within polar bear populations.

This asymmetry stems from mating biology, ecological behavior, and natural selection. Polar bears are induced ovulators, meaning the physical presence and stimulation of a male trigger ovulation. When a male brown bear emerges from winter hibernation and wanders onto coastal polar bear sea-ice habitat to scavenge, he can encounter a female polar bear, induce ovulation, and mate. The reverse scenario—a male polar bear mating with a female brown bear—is extraordinarily unlikely. Brown bears are seasonal ovulators, so temporal windows rarely align; furthermore, due to extreme size discrepancies and predatory habits, an aggressive male polar bear would likely kill a female brown bear rather than mate with her.

```mermaid flowchart TD accTitle: Asymmetric Gene Flow Between Brown and Polar Bears accDescr: Diagram showing how mating dynamics and selection prevent brown bear genes from entering polar bear populations.

subgraph Mating["Mating Encounter"] A["Male Brown Bear<br/>(Scavenging)"] -->|Mates with| B["Female Polar Bear<br/>(Induced Ovulator)"] B --> C["Hybrid Offspring<br/>Raised by Polar Bear Mother"] end

subgraph Selection["Adaptive Selection"] C --> D{"Coat Color & Hunting"} D -->|Brown Ancestry| E["Off-White / Muddy Fur"] E -->|Cannot Camouflage to Hunt Seals| F["Starvation in Arctic<br/>(Exluded from Polar Gene Pool)"] D -->|Survives as| G["Brown Bear Population<br/>(Retains Polar Bear Ancestry)"] end ```

Because bear cubs are reared exclusively by their mothers, one would expect these hybrid cubs to grow up in polar bear environments. However, polar bear biologists explain that any cub bearing brown bear admixture lacks the pure white camouflage essential for stalking seals on the ice. Unable to hunt effectively, they cannot survive in the high Arctic. Thus, while hybridization occurs without reproductive incompatibility at the cellular level, ecological adaptation acts as an unyielding filter, keeping the polar bear lineage genetically distinct while leaving a permanent footprint in living brown bears.

- Hybrid bears survive exclusively within the brown bear gene pool; brown bear DNA never integrates into polar bears. - Divergence time between brown bears and polar bears is approximately 500,000 years. - Polar bears are induced ovulators, whereas brown bears are seasonal ovulators.

---

[20:30](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=1230s) Skeletal Constraints, Dog Crosses, and Neanderthal Admixture

Drawing a parallel to artificial selection, Andrew Huberman points to domestic dogs like the English bulldog—a breed derived from bullmastiffs and pugs originally bred for bull-baiting to achieve a low center of gravity, a tenacious bite, and reduced pain sensitivity. Because the massive head cannot fit through the female's narrow birth canal, English bulldogs almost universally require cesarean sections to reproduce. Huberman speculates whether similar cephalopelvic disproportions might have doomed interbreeding between *Homo sapiens* and archaic hominins, where mismatched pelvic architectures might have prevented live births until specific adaptive mutations occurred.

Dr. Shapiro agrees that birth-related mortality has historically exerted immense selective pressure on human evolution, noting that modern aseptic techniques and C-sections have transformed human evolutionary trajectories (noting her own child was born via C-section). While little is known about whether pelvic geometry barred specific pairings, genomic sequencing has conclusively proved that *Homo sapiens* and Neanderthals successfully interbred, leaving 2% to 5% Neanderthal DNA in people living today.

Crucially, that 2% to 5% is not identical across individuals. The specific fragments preserved in one person's genome differ from those in another's. When researchers aggregate all surviving fragments across contemporary global populations, more than 90%—and likely upwards of 95%—of the total Neanderthal genome can be reconstructed solely from living humans. This finding demonstrates that the vast majority of the Neanderthal genome was not maladaptive in humans and could be integrated into healthy offspring. While hybrids between Neanderthals and Denisovans have been documented in the fossil record, there is currently no reciprocal evidence of *Homo sapiens* DNA introgressing into sequenced Neanderthal remains.

---

[24:15](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=1455s) Reconstructing the Human Genome: Ancient DNA as an Evolutionary Filter

Before the retrieval and sequencing of ancient Neanderthal DNA, identifying the specific genetic variations that make our species uniquely human required comparing human genomes against our closest extant evolutionary relatives: chimpanzees and bonobos. Because hominins diverged from chimpanzees roughly 3 to 5 million years ago, enormous amounts of neutral evolutionary divergence accumulated along both lineages. Every human generation introduces around 100 novel de novo mutations via copying errors during gametogenesis (sperm and egg production). Over millions of years, millions of random, non-functional mutations arise, making it nearly impossible to isolate functional differences from neutral background noise.

The sequencing of the Neanderthal genome dramatically transformed evolutionary genetics by shortening the evolutionary comparison window from 3 to 5 million years down to 300,000 to 500,000 years—an order of magnitude reduction. Furthermore, because roughly 95% of the Neanderthal genome is distributed across living people today, the search space for unique human-defining traits is narrowed even further to the missing ~5%. In those genomic regions where no living human possesses Neanderthal sequence, inheriting the Neanderthal variant was likely lethal or severely maladaptive. Those evolutionary deserts highlight precisely where modern human-specific mutations were strictly required for survival, pointing researchers toward the true genetic core of what defines *Homo sapiens*.

- Average human divergence from chimpanzees: 3,000,000 to 5,000,000 years. - Divergence between modern humans and Neanderthals: 300,000 to 500,000 years. - De novo mutation rate: approximately 100 new mutations per child due to copying errors during meiosis. - Roughly 5% of the human genome completely lacks introgressed Neanderthal variants, signifying essential human-specific adaptations.

---

[25:53](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=1553s) Neanderthal Genes: Adaptive Selection, Disease Risk, and Immunity

Huberman observes that direct-to-consumer genetic kits like 23andMe often spark cultural chatter, with some men boasting about Neanderthal percentages as supposed markers of physical "vigor," while women often react less enthusiastically. He asks whether Neanderthal genetics confer tangible physical resilience or durability. Shapiro explains that most introgressed Neanderthal DNA sits around an average baseline frequency of 2% to 3% across populations, evolving under neutral genetic drift rather than positive selection.

However, where natural selection actively acted on Neanderthal variants, introgressed alleles rapidly spiked to unusually high frequencies, signifying past adaptive utility:

- **Metabolic Risk**: Certain Neanderthal-derived alleles found at elevated frequencies in Latin American populations are strongly linked to an increased risk of developing type 2 diabetes. - **Pain Sensation**: Another variant linked to Latin American populations (including study cohorts in Colombia) alters baseline neurological pain perception. - **Immune Function and COVID-19**: During the pandemic, researchers discovered that immune genes derived from Neanderthals played polarized roles in SARS-CoV-2 outcomes. One specific Neanderthal-derived allele was found at roughly 50% frequency in Asian populations—dramatically higher than the 3% genome-wide average. This variant facilitates viral entry into lung tissue, conferring significant risk for severe respiratory complications. Its high historical prevalence suggests it likely conferred a vital survival advantage against an entirely different pathogen in antiquity, illustrating an evolutionary trade-off. Conversely, scientists also identified a separate Neanderthal allele that acts protectively against severe COVID-19.

[28:14](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=1694s) Disease Traces in Ancient DNA, Neanderthal Red Hair, and Eye Color Genetics

Ancient DNA provides a direct molecular record of how past populations coped with pathogens. Researchers can enter historical European graveyards, isolate the *Yersinia pestis* bacterium directly from dirt and skeletal remains, and trace how human immune systems adapted to plague exposure across generations.

The discussion shifts to Neanderthal phenotypic traits when Huberman notes a common claim made by red-haired friends: that they carry more Neanderthal ancestry and therefore possess heightened vigor and altered pain tolerance. Huberman mentions that pain specialists on his show have confirmed redheads require higher doses of anesthesia on average. Shapiro confirms that Neanderthals carried variants linked to red hair. Sequencing the *MC1R* gene—a primary regulator of red melanin production—reveals that both Neanderthals and woolly mammoths carried alleles associated with reddish hair. Mammoth mummies show reddish coats, though it remains debated whether the color reflects native pigmentation or post-mortem leaching.

Regarding eye color, Huberman asks about the hypothesis that all blue-eyed people descended from a single common ancestor, as well as the rarity of green eyes. Shapiro clarifies that dark eyes represent the ancestral state in humans, as observed across African populations. Diverse eye colors likely proliferated through sexual selection rather than clear survival advantages. Huberman jokes that blue eyes offered no obvious utility on an ancient hunt beyond looking "stoic and cool."

[30:17](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=1817s) Choosing De-Extinction Candidates: Technical, Ecological, and Social Filters

Huberman asks Shapiro how she decides which temporal epoch or extinct species to prioritize. Rather than focusing solely on living humans' 80-to-100-year lifespans or exclusively reviving recently lost taxa (like the Florida panther), Colossal Biosciences tackles deep-time de-extinction alongside contemporary conservation.

```mermaid flowchart TD accTitle: De-Extinction Feasibility and Selection Funnel accDescr: Three-stage decision pipeline showing the filters required to select an extinct candidate for revival.

subgraph Technical ["1. Technical Constraints"] A["Preserved DNA Available?"] -->|"< 1 to 2 Million Years"| B["Viable Genome Template"] A -->|"> 66 Million Years (Dinosaurs)"| Fail["Impossible: Mineralized Fossils"] end

subgraph Ecological ["2. Ecological Assessment"] B --> C["Extinction Driver Known?"] C --> D["Ecological Niche Intact?"] end

subgraph Implementation ["3. Restoration Goal"] D --> E["Ecosystem Resilience & Function Restored"] end ```

Shapiro outlines the framework from the opening chapter of her book, *How to Clone a Mammoth*: candidate selection rests on technical, ethical, ecological, and social parameters:

- **Technical limits**: Recoverable DNA has a strict hard limit. Dinosaurs went extinct 66 million years ago; their bones are entirely mineralized rock containing zero surviving endogenous DNA. The oldest DNA ever retrieved from bone comes from a mammoth dating to roughly 1 to 2 million years ago. - **DNA degradation pathways**: Upon organismal death, proofreading enzymes cease operating due to cellular energy depletion. DNA is degraded by three primary mechanisms: - *UV radiation*: Breaks DNA strands directly. - *Freeze-thaw cycles*: Expanding water crystals physically shear fragile DNA fragments. - *Microbial decay*: Bacteria and fungi consume tissues to recycle carbon and nitrogen. - **Thermal and geographic preservation**: DNA preservation mirrors food spoilage—freezing slows decay, whereas heat and moisture accelerate it. The permafrost of the Arctic rapidly entombs carcasses in frozen soil, preserving fragments across a million years. Conversely, tropical, waterlogged environments quickly destroy genetic material. Hundreds of dodo bones tested directly on the island of Mauritius failed to yield intact sequences; the high-quality dodo genome currently used by Colossal was derived from a single museum specimen transported alive to Europe and held at the Natural History Museum of Denmark. - **Preventing re-extinction**: A successful de-extinction project requires identifying why the target went extinct in the first place, ensuring that a revived population does not immediately suffer secondary extinction or disrupt incumbent species.

[36:10](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=2170s) Megaherbivores, Permafrost, and Pleistocene Park

Reviving extinct keystone species is driven by the need to stabilize degraded environments. Modern ecosystems are not static balances awaiting ancient animals, but the loss of megafauna has rendered many landscapes fragile. Restoring functional traits—rather than generating exact genetic replicas for novelty—can rebuild ecological resistance to human disturbances.

Megaherbivores play distinct, irreplaceable roles across ecosystems: - Large herbivores churn and aerate the soil through trampling. - They distribute vital nutrients and spread plant seeds across long distances. - While African elephants fell trees to maintain grasslands, Arctic mammoths operated above the tree line, shaping vast steppe ecosystems.

To demonstrate how megafauna restore grasslands, Shapiro highlights Pleistocene Park in northeastern Siberia, founded by Russian geophysicist Sergey Zimov and his son Nikita Zimov. The Zimovs introduced proxies for extinct northern herbivores—including Canadian bison, wild horses, multiple deer species, and muskoxen—into large fenced reserves. Their data show that herbivore grazing, trampling, and winter foraging force Arctic vegetation to rebound aggressively, preventing encroaching shrubland and altering how snow cover insulates the underlying permafrost.

[37:26](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=2246s) Ecosystem Engineering and Sponsor AG1

Large grazing animals play a profound, active role in sculpting their physical environment. When animals scrape snow off the dirt, they remove an insulator; left untouched, snow traps summer heat in the frozen sediment beneath, driving faster thaw and creating saturated ground that only supports narrow plant varieties. When large herbivores disrupt that snowpack, they produce a mosaic landscape composed of contrasting wet patches and exposed, dry, cold ground. This structural variation invites a broader diversity of returning vegetation, meaning these animals "are essentially recreating their ecosystem just by being there."

Huberman shifts to a brief sponsorship break for AG1, highlighting their updated AG1 Pro formulation. The new mix builds on the original blend of vitamins, minerals, probiotics, and adaptogens by adding three clinically backed compounds: five grams of creatine monohydrate to support muscle performance, strength, and brain health; calcium HMB (beta-hydroxy beta-methylbutyrate) to mitigate muscle breakdown and aid recovery; and zinc carnosine to bolster the integrity of the gut lining. He notes he has used AG1 daily for nearly fourteen years, well before he began podcasting, and shares that listeners can receive a free bottle of Omega-3 CoQ10 with a first subscription at drinkag1.com/huberman.

[39:21](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=2361s) De-Extinction Priorities, Synthetic Biology Stacks, and Why the Dodo

Huberman returns to the central question of species selection: since scientists cannot revive every lost creature from a given geological period, what dictates which animals get picked? Shapiro points out that beyond technical feasibility, ethical considerations, and ecological utility, a critical selection filter is real-world impact. When she joined Colossal Biosciences, the company possessed active programs for the woolly mammoth (a placental mammal) and the thylacine or Tasmanian tiger (a marsupial mammal), but no avian effort existed. Shapiro pushed aggressively for an avian de-extinction wing because birds rank among the most critically endangered organisms on Earth.

The fundamental reason to pursue these targets lies in the tools themselves: the synthetic biology pipeline engineered to bring back extinct creatures is identical to the toolkit needed to genetically intervene in living populations to stave off modern extinctions. That technology stack encompasses:

- Multiplex genome engineering - Cellular rejuvenation protocols - Induced pluripotent stem cell (iPSC) technologies optimized for wild and non-model species - Deciphering the functional links connecting individual nucleotide sequences to physical phenotypes

Mammalian de-extinction relies on somatic cell nuclear transfer (SCNT)—the classic cloning method that produced Dolly the sheep. However, SCNT is physically impossible in birds because researchers cannot access avian ova at the appropriate developmental stage inside the female reproductive tract. Creating an avian de-extinction pipeline therefore demanded the invention of entirely novel avian reproductive technologies. As for why Colossal chose the dodo (*Raphus cucullatus*) as its flagship avian species over other candidates, Shapiro admits the choice rests on the sheer power of human awe. The dodo captivates public imagination with its friendly, cartoonish, toucan-like beak—immortalized in *Alice in Wonderland* and historical sketches—and children frequently mail drawings of mammoths, thylacines, and dodos to the office. While thousands of subfossil dodo bones have been unearthed in Mauritius, Shapiro notes with self-deprecating humor that none have yielded DNA despite her team's best efforts.

```mermaid flowchart TD accTitle: De-Extinction Pipeline Transfer accDescr: Diagram showing how the synthetic biology de-extinction toolkit feeds directly into modern endangered species conservation.

subgraph TechStack["Synthetic Biology Toolkit"] A["Multiplex Genome Engineering"] B["Cellular Rejuvenation"] C["Wild Species iPSC Technologies"] D["Genotype-to-Phenotype Mapping"] end

subgraph Targets["Core Target Programs"] E["Mammalian / SCNT<br>(Woolly Mammoth)"] F["Marsupial / SCNT<br>(Thylacine)"] G["Avian / Non-SCNT<br>(Dodo)"] end

subgraph Conservation["Conservation Impact"] H["Genetic Rescue & Immune Enhancement<br>for Endangered Living Species"] end

TechStack --> Targets Targets --> Conservation ```

[42:05](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=2525s) Avian Parthenogenesis, Meiosis Errors, and Genomic Imprinting

Huberman brings up an intriguing avian genetics phenomenon: reports of two female California condors reproducing without males. Shapiro clarifies the biology, explaining that it was not two females mating, but rather a single female reproducing all on her own through parthenogenesis—a real-life instance of "life finds a way." Under normal sexual reproduction, meiosis halves the genetic complement of a precursor cell to generate gametes (sperm or egg) carrying a single set of chromosomes, which fuse upon fertilization to produce an embryo with paired maternal and paternal chromosomes. In the condor event, a failure occurred during meiosis where the homologous chromosomes or sister chromatids failed to separate properly. This left the egg with a full diploid complement entirely from the mother, yet it miraculously remained viable and developed to term.

```mermaid flowchart LR accTitle: Normal Meiosis vs Parthenogenetic Meiotic Failure accDescr: Contrast between normal gamete fusion and meiotic non-disjunction resulting in viable diploid eggs.

subgraph Normal["Normal Sexual Reproduction"] A1["Maternal Diploid Cell"] -->|"Meiosis"| B1["Haploid Egg (n)"] A2["Paternal Diploid Cell"] -->|"Meiosis"| B2["Haploid Sperm (n)"] B1 & B2 -->|"Fertilization"| C1["Diploid Offspring (2n)"] end

subgraph Parthenogenesis["Condor Parthenogenesis"] D1["Maternal Diploid Cell"] -->|"Meiotic Non-Disjunction"| E1["Diploid Egg (2n)"] E1 -->|"Autonomous Development"| F1["Viable Diploid Offspring (2n)"] end ```

Huberman and Shapiro discuss why this form of uniparental inheritance produces severe developmental defects in humans rather than healthy offspring: - **Genomic Imprinting:** Mammalian development requires differential gene expression regulated by parent-of-origin epigenetic marks. In conditions such as Prader-Willi syndrome and Angelman syndrome, losing either the paternal or maternal expression of specific chromosomal regions causes profound neurological and physiological impairment; inheriting two maternal or two paternal copies of a chromosome prevents normal development. - **Sex Determination Pathways:** A human embryo inheriting solely maternal genetic material cannot develop male anatomy, as initiation of male sexual differentiation requires the *SRY* gene located exclusively on the Y chromosome. - **Aneuploidies and Dosage:** While extra chromosomes typically disrupt strict gene-dosage balance, Trisomy 21 (Down syndrome) remains the most common autosomal trisomy compatible with extended survival into adulthood, whereas most other chromosomal duplications prove embryonic-lethal.

[45:32](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=2732s) Divergent Sex Determination Mechanisms across the Tree of Life

Addressing whether ancient DNA reveals non-standard reproductive modes, Shapiro underscores that sex determination has evolved repeatedly across independent branches of life. Mammals employ the XY system, where males constitute the heterogametic sex ($XY$) and females are homogametic ($XX$). In birds, the pattern is reversed via the ZW system: females represent the heterogametic sex ($ZW$), carrying two distinct chromosomes, while males are homogametic ($ZZ$). In other taxa, such as alligators and crocodiles, sex determination is completely non-genetic, governed instead by the ambient nest incubation temperature during a critical embryonic window.

Huberman notes how these biological facts contrast with pervasive online folklore claiming human sex determination can be altered by coital positions, temperatures, or specific maternal diets—none of which beat raw 50/50 chance. The only reliable method to select biological sex or specific genetic outcomes remains targeted clinical interventions like intracytoplasmic sperm injection (ICSI), where embryologists manually select and inject an individual sperm cell directly into an egg.

[46:51](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=2811s) Sex Selection and Germline Genetics

Huberman and Dr. Beth Shapiro discuss how sex selection works in modern reproductive biology. Shapiro explains that sperm can be physically sorted because the Y chromosome is significantly smaller and lighter than the massive X chromosome. By centrifuging sperm samples, technicians can separate them based on weight and density to heavily bias the likelihood of selecting an X- or Y-bearing sperm—prompting Huberman to joke, "Don't do this at home." However, Shapiro points out that Colossal Biosciences bypasses this entirely by using synthetic biology and somatic cell cloning. Because they begin with an adult tissue cell of known biological sex rather than combining a random sperm and egg, the chromosomal sex is determined from the outset.

Huberman pivots to developmental biology, noting how human gametes carry 23 chromosomes via meiosis to form a diploid embryo upon fertilization, whereas other species present bizarre exceptions. Shapiro highlights bird reproduction as notoriously complex. During her work at Colossal, she encountered avian species that possess a "germline-restricted chromosome"—a unique chromosome that literally does not exist in somatic cells, appears exclusively inside the germline (the sperm and eggs), and subsequently vanishes. In addition, birds possess tiny microchromosomes that make sequencing and computational genome assembly extremely difficult when dealing with the fragmented ancient DNA typical of extinct species.

[49:01](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=2941s) Mammoths, Asian Elephants, and the Jurassic Park Fallacy

Addressing how scientists definitively classify the extinct woolly mammoth as a mammal, Shapiro explains that researchers rely on high-quality, whole-genome assemblies sequenced from multiple mammoth remains spanning the last 1.5 million years. Computational phylogenetic alignment reveals that the woolly mammoth's closest living relative is the Asian elephant. Counterintuitively, woolly mammoths and Asian elephants are more closely related to each other than Asian elephants are to African elephants, firmly nesting the mammoth within the elephant family tree.

```mermaid flowchart TD accTitle: Elephantidae Family Relationships accDescr: Phylogenetic tree showing that woolly mammoths are more closely related to Asian elephants than Asian elephants are to African elephants. subgraph Elephantidae ["Elephantidae Family"] Anc["Common Ancestor"] --> Afr["African Elephant<br><i>(Loxodonta)</i>"] Anc --> AsianBranch["Mammoth / Asian Elephant Lineage"] AsianBranch --> Asian["Asian Elephant<br><i>(Elephas maximus)</i>"] AsianBranch --> Mammoth["Woolly Mammoth<br><i>(Mammuthus primigenius)</i>"] end ```

Huberman asks whether Colossal is synthesizing an entirely ancient mammoth genome from scratch. Shapiro clarifies that the popular perception of de-extinction is deeply distorted by *Jurassic Park*, which she laughs off as decidedly "not a documentary." In the movie, scientists extracted dinosaur blood from amber-preserved mosquitoes and patched the missing DNA gaps with frog DNA—an odd creative choice given that science already recognized birds as avian dinosaurs. Real de-extinction is fundamentally different and far more efficient:

- Asian elephants and woolly mammoths already share approximately 99% of their genome sequence. - This degree of genetic identity mirrors the roughly 99% similarity between humans and chimpanzees. - Rather than manufacturing an organism from scratch, researchers edit the few functional regions of the host genome where the extinct species differs.

[52:19](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=3139s) Redefining De-Extinction: Beyond Definitional Gatekeeping

Addressing whether the goal is an exact ancient clone or a functional hybrid, Shapiro rejects the strict "genetic species concept." Under that framework, an organism is only deemed a true species if it satisfies an arbitrary threshold of sequence identity derived through slow, bifurcating evolutionary descent over millennia. Shapiro argues that synthetic biology and de-extinction operate outside that paradigm, making strict phylogenetic gatekeeping irrelevant. Individual woolly mammoths themselves differed from one another by millions of base pairs, meaning there is no single monolithic "mammoth genome" to duplicate.

Instead of replicating an individual ancient specimen, Colossal targets the specific loci shared across all woolly mammoths that differentiate them from Asian elephants—the functional adaptations responsible for traits like cold tolerance, hair, fat distribution, and physiology. The ultimate objective is to produce a cold-tolerant elephant capable of thriving in the mammoth’s former ecological niche. Crucially, these animals must survive modern conditions:

- They must endure contemporary and future climates, pathogens, microbes, and available forage. - They must be compatible with the microbiome and physiology of the surrogate elephant mothers that carry them.

When Huberman brings up the media controversy surrounding the dire wolf, Shapiro dismisses "species nomenclature gatekeeping" as mere noise that distracts from the true potential of the field. Synthetic biology tools should be judged by their real-world impact: restoring ecosystem resilience, preventing modern endangered species from going extinct, and advancing human medicine. Huberman agrees that while pop culture touchstones like *Jurassic Park* generated tremendous public fascination for science, they also entrenched rigid, unrealistic expectations of what modern biotechnology is actually doing.

[55:41](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=3341s) Engineering the Dire Wolf Genome

Huberman opens by reflecting on how public perception diverges from scientific reality, referencing *Jurassic Park* where dinosaurs were resurrected by blending ancient DNA with frog DNA without the public disputing their authenticity. He shares an anecdote about his father, a theoretical physicist involved in chaos theory, who rolled his eyes at the film's simplistic Hollywood depiction of the butterfly effect (a butterfly flapping its wings in Patagonia impacting a barista in Brooklyn). Huberman points out that while oversimplifications can grate on domain experts, everyday people are generally receptive once the nuance is explained clearly.

Dr. Beth Shapiro describes how Colossal Biosciences approached bringing back the dire wolf. After sequencing genomes recovered from fossil dire wolves, researchers identified the genetic variants responsible for making them larger, more robust, and lighter-coated than extant canids. The team then engineered 20 specific edits into the genome of a modern grey wolf (*Canis lupus*) to recreate the phenotype. Shapiro emphasizes her operational definition of de-extinction: "If it looks like a dire wolf and it's able to fill the niche of a dire wolf, I'm happy to call it a dire wolf."

```mermaid flowchart TD accTitle: Dire Wolf Genetic Engineering Workflow accDescr: Step-by-step process of sequencing fossil dire wolf genomes and engineering verified edits into grey wolf DNA. subgraph Discovery["1. Discovery Phase"] A["Fossil Dire Wolf DNA"] --> B["Genome Sequencing"] B --> C["Identify Extinct Traits:<br/>Large size, robust frame, light coat"] end subgraph Safety["2. Safety & Welfare Screening"] C --> D{"Direct fossil mutations<br/>safe in grey wolf?"} D -- No: Risk of oculocutaneous albinism --> E["Select safe, proven light-coat edits<br/>from living domestic dogs/wolves"] D -- Yes --> F["Retain dire wolf functional variants"] end subgraph Engineering["3. Engineering Phase"] E --> G["20 Targeted Edits"] F --> G G --> H["Engineered Grey Wolf Genome"] end ```

[57:42](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=3462s) Animal Welfare, Phenotype Fidelity, and Gene Selection

Huberman asks whether the dire wolf differs from a standard grey wolf merely in size or across other physiological systems. Shapiro explains that they are noticeably larger, more muscular, and have longer, fuller, light-colored fur. While the ultimate objective for candidate de-extinction species (like the thylacine or woolly mammoth) is to establish free-roaming, wild populations, Colossal does not intend to rewild dire wolves into the wild. Instead, they serve as a critical study system to understand gene function and longevity.

Crucially, Shapiro highlights animal welfare as a non-negotiable constraint when editing living genomes. When sequencing fossil dire wolves, researchers identified two specific gene variants that produced their light coat. However, in living grey wolves and domestic dogs, edits in those exact genomic regions can cause bystander mutations linked to oculocutaneous albinism, resulting in severe defects such as blindness and deafness:

* **Animal Welfare Hurdle:** Because the engineered animals retain an underlying grey wolf genetic background, introducing those exact fossil variants posed unacceptable medical risks. * **Synthetic Biology Workaround:** The team opted to engineer the light coat using alternate genetic edits already proven safe and functional in domestic dogs and light-coated grey wolves. * **Systemic Engineering Parallels:** Shapiro compares this to their woolly mammoth project, where turning an Asian elephant cold-tolerant involves altering not just hair protein structure, but dermal architecture, follicle density, and sebaceous gland output—all within an animal carrying a 22-month gestation period and a 14-year timeline to sexual maturity.

[01:00:20](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=3620s) Living Dire Wolves: Romulus, Remus, and Khaleesi

Huberman inquires about the actual living dire wolves created so far. Shapiro shares that three individuals currently exist: two males named Romulus and Remus, who are nearly two years old, and a female named Khaleesi, who is approximately 18 months old. They are housed together, but hormonal contraception is administered to prevent them from mating because they are too closely related.

Their behavioral profiles illustrate the tension between captive rearing and innate wild instincts: * **Early Socialization:** The twin males were raised together, whereas Khaleesi was hand-reared alone, leaving her somewhat goofy and affectionate with handlers, though none display the behavior of a domestic pet. * **Twin Temperaments:** Despite being identical twins, Romulus and Remus exhibit distinct personalities. Remus is bolder and will eventually approach and sniff an observer who sits quietly, while Romulus is skittish and avoids human contact. * **Size and Wild Nature:** Both males weigh at least 120 pounds, putting them at the top end of grey wolf size metrics. Handlers must observe strict safety protocols, as their size and wild canid drives make them dangerous to unfamiliar individuals.

[01:01:41](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=3701s) Canid Genetics, Breed Myths, and Future Packs

Huberman and Shapiro discuss how behavior in wolves compares to domestic dogs. Shapiro recommends the work of Dr. Elinor Karlsson at the Broad Institute and UMass, whose research on dog and wolf-dog hybrid genomes demonstrated that popular breed behavioral stereotypes lack a strong genetic basis. Huberman adds insights from animal trainer Cesar Millan, noting that society tends to demonize different dog breeds each decade—moving from German Shepherds post-World War II to Doberman Pinschers, English Bulldogs, and modern Pit Bulls—while veterinary bite statistics often point to breeds like Chow Chows.

Shapiro explains that coat color and pigment patterns (such as the Chow Chow's blue tongue or thylacine striping) are among the best-mapped traits in mammalian genetics. Deciphering how these specific developmental programs operate—whether creating a tiger-striped marsupial or dense mammoth underfur—remains one of the central frontiers in evolutionary biology. When asked about Colossal's next steps with dire wolves, Shapiro notes that while their immediate focus is on other species, the eventual plan includes producing an entire, synchronized pack to observe pack dynamics and rigorously model canid ecological impacts.

[01:03:56](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=3836s) De-Extinction, Regulations, and the American Chestnut

Beth Shapiro addresses a common rumor about de-extinction: the idea that scientists will simply edit an Asian elephant genome, produce a mammoth, and promptly turn it loose into the wilds of Alaska. She rejects this outright. First, producing that initial animal will be extraordinarily difficult, meaning researchers will prioritize keeping it safe, well-cared for, and closely monitored. Second, scientists are not operating on an unregulated private island like the fictional premise of *Jurassic Park*; they operate within stringent legal frameworks, working under Institutional Animal Care and Use Committee (IACUC) protocols and the oversight of numerous regulatory agencies before any living creature can be released.

```mermaid flowchart TD accTitle: Genetic Restoration of the American Chestnut Tree accDescr: Diagram illustrating the decline of the American chestnut due to fungal blight and its modern genetic rescue and deregulation.

subgraph Collapse["20th-Century Ecological Collapse"] A["Dominant Eastern Forest Tree<br>(Prolific Keystone Species)"] --> B["Accidental Fungal Import<br>(From Chinese Chestnut)"] B --> C["Blight Outbreak<br>(~1 Billion Trees Lost in a Decade)"] end

subgraph Restoration["Modern Synthetic Biology Rescue"] C -.-> D["Genetic Modification / Editing<br>(Blight Resistance Engineered)"] D --> E["USDA Deregulation Approval<br>(First Conservation-Targeted GMO)"] end ```

Shapiro highlights a recent milestone: the USDA had just deregulated the very first genetically modified organism engineered explicitly for ecological restoration and conservation—the blight-resistant American chestnut tree. The American chestnut was historically the most prolific tree across eastern North American forests until the early 20th century. A pathogen introduced through imported Chinese chestnut trees caused a fungal blight that wiped out an estimated one billion trees within roughly ten years. Synthetic biology offers the tools to reverse that devastating loss, providing a template for how biotechnology can aid conservation rather than purely commercial agriculture.

[01:05:33](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=3933s) Ecological Biosecurity and Human Interference

Andrew Huberman shares a personal story illustrating the unease surrounding unregulated biological introductions. Around 2016 or 2017, while living in the East Bay area of California, he received an unsolicited, thin envelope in the mail containing a quarter-sized plastic packet labeled "free seeds for gardening." Digging into the phenomenon online, he realized similar mysterious seed packages were arriving from China nationwide. Plant biologist colleagues, including researchers at UC Santa Cruz, gave him a stern warning: never plant unknown foreign seeds outdoors. Birds consume them, deposit seeds elsewhere through their droppings, and invasive plants can take root and outcompete native flora, prompting Huberman to reflect on the real potential for plant-on-plant ecological harm.

Shapiro agrees that introductions must be approached with scientific caution. For example, Colossal Biosciences would not release de-extinct dire wolves into the wild because they would directly compete with modern gray wolves, which are already struggling to survive. However, she points out that humanity has shaped ecosystem dynamics for tens of thousands of years:

- Human ancestors drove megafauna to extinction across Australia roughly 50,000 years ago and across Asia 30,000 years ago through overhunting. - Humans actively domesticated plant and animal lineages and distributed species across the globe, such as introducing English songbirds to North America and New Zealand simply out of nostalgia. - Conservation today is not passive preservation where nature is left entirely alone; humans actively vaccinate wild populations, cull or protect them from predators, manage food availability, and artificially cap population sizes. - Relying on the contemporary state of an ecosystem as an absolute baseline is a fallacy that treats an arbitrary slice of history as an idealized ecological standard. - Ecological redundancy—where multiple species occupy overlapping ecological niches—builds resilience, allowing ecosystems to withstand external shocks and environmental shifts.

[01:09:14](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=4154s) Nostalgia, Novelty, and Ecosystem Resilience

Huberman and Shapiro explore the psychological barriers people face when confronting synthetic biology and ecological interventions. Huberman notes a paradoxical mindset: humans either adopt an arrogant stance assuming they understand every facet of nature, or adopt a defeatist view that human action can never positively contribute to evolution. Much of this resistance stems from nostalgia—the false belief that historical eras were idyllic, overlooking hardships like dysentery and the absence of antibiotics, as chronicled in Otto Bettmann's book *The Good Old Days—They Were Terrible!*.

Because humans lack a window into the future, novel introductions provoke deep anxiety about unpredictable variables. Huberman cites the Channel Island foxes on Anacapa and Santa Rosa islands off Santa Barbara. Genetic and archaeological evidence suggests the Chumash people originally brought those foxes to the islands on boats. Because that introduction was carried out long ago by Native Americans, society views the foxes as native biodiversity to be rigorously protected, rather than an invasive menace to be eradicated.

Shapiro explains that her conceptual framework centers on building ecosystem resilience. When apex species are absent, entire habitats destabilize. She references the classic trophic cascade in Yellowstone National Park: after gray wolves were eliminated, herbivore populations exploded, overgrazed the riverbank shrubbery and willows, and triggered systemic ecological decay. Reintroducing gray wolves reestablished top-down predatory pressure, fundamentally reshaping and recovering the entire balance of the ecosystem.

[01:12:12](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=4332s) Restoring Apex Predators: The Thylacine and Tasmanian Devil Facial Tumors

Beth Shapiro reflects on how apex predators reshape entire landscapes—such as wolves altering plant growth and river courses in Yellowstone—before turning to Colossal Biosciences' second announced de-extinction target: the thylacine, or Tasmanian tiger. The thylacine was once the apex predator of Tasmania, and its absence has left an ecological void that destabilized the island's wildlife. Shapiro asks Andrew Huberman if he is familiar with the horrific photos of Tasmanian devil facial tumor disease (DFTD).

Huberman notes that the disease came up on a previous episode with biochemist Jared Rutter while discussing transmissible cancers and mitochondria. Tasmanian devils bite and scratch one another during social interactions and fights; because the devil population is so genetically uniform and inbred, their immune systems do not recognize foreign cancer cells as non-self, allowing the contagious facial tumors to spread unchecked and decimate their numbers. Shapiro points out that in an intact ecosystem, an apex predator like the thylacine would naturally cull weak, disfigured, and sick individuals from the population early on, preventing such virulent outbreaks from ravaging the entire species. Reintroducing an apex predator is therefore an act of restorative ecological health rather than mere novelty.

[01:13:24](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=4404s) Genetic Rescue: Saving the Northern Quoll from Toxic Cane Toads

Addressing a frequent public criticism—"Why are you trying to bring back dead animals instead of saving endangered ones?"—Shapiro explains that de-extinction and extant species conservation are two sides of the same coin. They rely on the exact same molecular tools, synthetic biology infrastructure, and genomic databases. High-profile projects like the woolly mammoth, dodo, and thylacine capture global imagination and drive vital capital and technological development, which can then be deployed directly to protect living wildlife.

As a prime example, Colossal’s team in Australia is currently working to prevent the extinction of the northern quoll, a small, carnivorous marsupial. Quolls are voracious predators of amphibians, putting them on a direct collision course with cane toads—an invasive, intensely poisonous amphibian introduced to Australia that kills domestic dogs, quolls, and nearly anything else that attempts to eat it. Left unaddressed, northern quolls face likely extinction within decades.

Through comparative evolutionary biology, scientists identified mammals on other continents that regularly consume toxic toads without harm. These toad-resistant species share a single nucleotide substitution in a specific gene, altering just one amino acid. Colossal Australia successfully introduced that exact point mutation into the quoll genome. In vitro dish assays confirm that cells bearing this single edit resist the cane toad toxin, demonstrating how targeted gene editing can bestow immediate evolutionary rescue to an imperiled native species.

```mermaid flowchart TD accTitle: Northern Quoll Genetic Rescue Pathway accDescr: Diagram illustrating how comparative genomics enables single-nucleotide gene editing to protect quolls from invasive cane toads.

subgraph Problem ["Ecological Crisis"] A["Invasive Cane Toads<br/>(Lethal Bufotoxin)"] B["Native Northern Quolls<br/>(Dasyurus hallucatus)"] A -->|"Ingestion leads to death"| B B -->|"Projected extinction within decades"| C["Species Extinction"] end

subgraph Solution ["Synthetic Biology & Comparative Genomics"] D["Identify Toad-Resistant Mammals<br/>(Global comparative genomics)"] E["Isolate Target Gene & Identify<br/>Single Amino Acid Substitution"] F["Precision CRISPR / Gene Edit<br/>applied to Quoll cells"] D --> E --> F end

subgraph Outcome ["Ecosystem Resilience"] F --> G["Toxin-Resistant Quoll"] G -->|"Safe consumption of Cane Toads"| H["Population Recovery & Biocontrol"] end ```

- **Threat to Northern Quolls**: Consumption of lethal invasive cane toads with no natural evolutionary resistance. - **Genetic Fix**: A single nucleotide change encoding an altered amino acid in a toxin-binding receptor. - **Validation**: In vitro assays verify cellular resistance to cane toad poison, paving the way for living, toad-immune quolls.

[01:15:45](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=4545s) Sponsor: Function

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[01:17:23](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=4643s) Public Distrust, Unintended Consequences, and the Mosquito Dilemma

Returning to the broader implications of biotechnology, Huberman reflects on the widespread public anxiety and skepticism toward the scientific establishment, a tension dramatically exacerbated during the COVID-19 pandemic. He stresses the need to dismantle the cynical belief that researchers are merely self-serving or reckless careerists operating without regard for humanity, noting parallels to current public anxieties surrounding artificial intelligence. People often fear that scientists are rushing into massive interventions without thinking through secondary and tertiary consequences.

To explore this, Huberman raises the contentious debate around mosquitoes and genetic pest management, referencing work on mosquito olfaction conducted by neurobiologist Leslie Vosshall (now head of the Howard Hughes Medical Institute). Because mosquitoes vector deadly parasites like malaria and viruses like dengue, scientists have proposed genetic solutions such as gene drives or mass sterile-male releases to crash mosquito populations. However, ecologists immediately warn of unintended trophic domino effects, such as starving insectivorous birds or disrupting freshwater food webs. Huberman asks Shapiro how conservation biologists can responsibly model the complex ramifications of modifying or eradicating a single ecological node.

Shapiro acknowledges that eradicating an entire family of insects is fraught with risk, but clarifies an essential biological nuance: not all mosquitoes bite humans or spread disease. Dangerous pathogens like malaria, dengue, and yellow fever are transmitted by a select few vector species, such as specific *Anopheles* or *Aedes* mosquitoes. Furthermore, because human urbanization creates vast amounts of artificial standing water, human-biting vector mosquitoes exist at unnaturally inflated, hyper-dense population levels compared to truly pristine wilderness settings. Bringing those overabundant vector populations down to natural baseline densities does not pose the same catastrophic ecological risk as wiping out entire native insect guilds.

[01:20:58](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=4858s) Gene Drives, Invasive Plants, and Controlled Genetic Modification

Beth Shapiro notes that while many mosquito infestations are driven by humans leaving standing water around, in places like the Arctic, a "bazillion mosquitoes" thrive naturally without people, making fieldwork miserable. While Andrew Huberman admits his instinctive reaction as someone who despises mosquito bites is to want them eradicated, Shapiro cautions that the ecological reality is far more delicate. Rather than driving species to extinction, synthetic biology can engineer mosquitoes to render them incapable of transmitting pathogens. This brings the conversation to gene drives—genetic systems that bypass standard Mendelian inheritance so engineered modifications spread rapidly across subsequent generations.

```mermaid flowchart TD accTitle: Self-Limiting Gene Drive Mechanics accDescr: Flow diagram showing how natural selection opposes reproductive-limiting gene drives, leading to an eventual return to baseline unless continually selected. subgraph GD["Engineered Intervention"] A["Gene Drive Introduced into Population"] --> B["Suppression of Reproductive Output"] end subgraph NS["Evolutionary Backlash"] B --> C["Intense Natural Selection Against Drive"] C --> D["Driver Mutations / Escapees Favored"] D --> E["Population Returns to Natural Baseline"] end ```

Shapiro explains that gene drives can incorporate molecular switches limiting them to a preprogrammed number of generations. Furthermore, because gene drives engineered for population suppression reduce reproductive fitness, natural selection acts powerfully against them. Any spontaneous mutation that disrupts the gene drive and restores reproductive capacity is heavily favored by evolution, meaning gene drives tend naturally to phase themselves out rather than run rampant.

Shapiro argues that this powerful tool could remediate widespread environmental crises, such as cheatgrass invasion across the western United States. Originally introduced from the Mediterranean, cheatgrass outcompetes native California flora, has shallow root systems, and parches rapidly at the start of summer. In contrast, native perennial bunchgrasses feature deep root systems that hold moisture, keep plants green longer into fire season, and sequester deep soil carbon. Cheatgrass carpets the landscape in flammable fuel, driving severe wildfires that devastate western forests and destroy homes. Deploying a self-limiting gene drive against cheatgrass for just a few generations could tamp down the seed bank enough for deep-rooted native grasses to re-establish, rebuilding an ecosystem that is both wildfire-resilient and biodiverse.

[01:23:44](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5024s) The Reality of Intervention: Texas Panthers and the Cost of Inaction

To illustrate the proven necessity of genetic rescue, Shapiro highlights the Florida panther recovery program in the mid-1990s. With their population reduced to a tiny, isolated band, the panthers suffered severe inbreeding depression: - Individuals presented with kinked, crooked tails and pronounced cowlicks along their coats. - Male panthers suffered heavily from cryptorchidism (undescended testicles), threatening total reproductive collapse.

Wildlife managers translocated female Texas cougars (panthers) into Florida to introduce fresh genetic variation. The intervention proved immensely successful: reproductive health rebounded, and morphological defects vanished within a single generation. However, because modern Florida panthers remain geographically hemmed in by human development and cannot naturally connect with western populations, the genetic diversity has once again eroded, requiring ongoing active stewardship.

Shapiro emphasizes that human activities have already fractured ecosystems worldwide, forcing endangered species into evolutionary bottlenecks. Natural selection operates far too slowly to outpace the velocity of human-caused changes. She argues that rejecting synthetic biology, assisted reproduction, translocations, or de-extinction on the grounds of risk is an ethical mistake: "Doing nothing is not not deciding. Doing nothing is saying we accept the fact that we are going to have a future that is less biodiverse than the present."

[01:25:50](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5150s) Public Trust, Advisory Panels, and the Dire Wolf Revelation

Huberman draws a parallel to public health policies during the COVID-19 pandemic, observing that broad skepticism arises when a single spokesperson attempts to issue top-down pronouncements rather than presenting balanced deliberations that include dissenting voices. Shapiro wholeheartedly agrees, explaining that every Colossal project operates in lockstep with localized, transparent advisory bodies: - **Thylacine (Tasmanian Tiger) Project:** Guided by a diverse Tasmanian panel composed of local politicians, commercial timber/forestry operators, wildlife caretakers, field scientists, and conservation biologists long before any animal is ready for reintroduction. - **Moa Project:** Co-led by the Ngāi Tahu Research Centre on the South Island of New Zealand, ensuring the indigenous Māori people—as the rightful long-term stewards—determine which moa species to bring back, how many are produced, and where releases take place.

Shapiro underscores that public communication is central to Colossal's mission. Despite pushback from critics who demand to know "Why is Colossal always talking about what Colossal is doing?", she refuses to retreat into an academic ivory tower. When the dire wolf genetic engineering story went public, it sparked heated academic debates over nomenclature, but it also inspired intense curiosity among middle schoolers, high schoolers, and college undergraduates across ecology, sociology, and anthropology departments. Shapiro describes the experience of seeing the engineered dire wolves for the first time as an overwhelming, authentic sensation of awe—a mindset of possibility that invites the public to participate in shaping the planet's ecological future.

[01:29:13](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5353s) Crossing into Deep Water: Human Genetic Selection and IVF

As the conversation turns toward applying advanced biology to our own species, Shapiro quips, "As long as we're wading into deep water here, let's talk about the really deep water, which is humans." Huberman points out that society already engages in technological genetic selection through in vitro fertilization (IVF) coupled with pre-implantation genetic testing. Prospective parents routinely screen and select embryos based on genetic health markers, actively filtering out specific mutations and traits. Despite its ubiquity, few people pause to consider how systematically selecting human embryos alters the broader human genetic ecosystem, drawing a provocative parallel to the synthetic biology debates surrounding wild species.

[01:29:40](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5380s) CRISPR Babies and the Ethics of Human Germline Editing

A few years ago, a researcher in China who had completed postdoctoral training at Stanford shocked the global scientific community by using CRISPR gene editing to alter the genomes of twin human embryos. The modification targeted and disrupted the CCR5 gene, which encodes the primary co-receptor used by HIV to infect immune cells. Two conflicting narratives immediately emerged around his motives. One held that the intervention was strictly benevolent, aimed at protecting the infants from contracting HIV because their father was HIV-positive. A parallel and far more controversial narrative suggested the modification might also alter hippocampal and neural circuitry to enhance specific dimensions of cognitive capacity, effectively making it an unsanctioned eugenics experiment.

Beth Shapiro recalls the acute drama of the disclosure, noting that journalist Antonio Regalado broke the story roughly a week before the International Summit on Human Genome Editing. In that brief window, the global scientific community was gripped by bizarre uncertainty. It was completely unclear whether the researcher would be celebrated with a Nobel Prize or condemned to prison. As leaked emails began circulating, scientists hesitated, "tap dancing" around the issue to see whether associating with the experiment would bring prestige or irreversible blacklisting. The consensus shifted decisively toward condemnation: the Chinese government shut down his laboratory, and he received a prison sentence.

[01:31:14](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5474s) Embryo Screening, Mate Choice, and Ancient Height Genes

Following the Chinese CRISPR incident, commercial genomics moved rapidly into the reproductive sphere. Andrew Huberman observes that at least four major biotechnology companies have launched deep-sequencing services for embryos, catering to both in vitro fertilization (IVF) patients and broader pre-implantation screening. Prospective parents are already being handed profile reports predicting which embryo has the highest statistical likelihood of superior IQ, tallest height, or lowest disease risk. While clinical screening originally focused on ruling out fatal monogenic disorders, consumer demand is shifting toward polygenic trait optimization. Although critics denounce this as modern eugenics accessible only to the affluent, Huberman emphasizes that human mate selection has always been a form of selective breeding based on physical, cognitive, emotional, and resource-driven criteria.

Shapiro connects this dynamic to ancient human DNA and human psychology. Whenever groundbreaking technologies emerge, human evolutionary instincts—the "reptile brain"—compel people to fear the unknown before curiosity can take over. Yet visible genetic selection has operated across human history without petri dishes. A clear, benign example is human height. While traits like IQ involve deeply polygenic, culturally variable architectures that remain nearly impossible to map accurately, height is highly heritable and physically measurable. Shapiro jokes about her own five-foot stature, noting she inherited none of the tall alleles: visiting the Netherlands—home to some of the tallest people on Earth—made her feel like "a tiny car where with a lot of big trucks on the highways."

```mermaid flowchart TD accTitle: Historical and Modern Drivers of Human Genetic Selection accDescr: Diagram tracing ancient ancestral gene flow to modern reproductive technologies and ethical dilemmas.

subgraph Ancient["Ancient Evolutionary Selection"] Yamnaya["Yamnaya Steppe Pastoralists<br>(Introduced tall alleles ~4,700 ya)"] --> Europe["Spread across Northern Europe"] Europe --> Plateau["Phenotypic Height Plateau<br>(Modern environmental & genetic limit)"] end

subgraph MateChoice["Behavioral Selection"] Partner["Mate Selection<br>(Physical, cognitive, resource cues)"] --> NaturalSelection["Non-random gene transmission across generations"] end

subgraph Modern["Modern Genomic Technologies"] EmbryoSeq["Polygenic Embryo Screening<br>(IVF optimization for height, IQ, disease)"] BaseEdit["Somatic Gene Editing<br>(Targeted therapeutic cures, e.g., Baby KJ)"] end

Ancient --> Perception{"Public Perception & Ethics"} MateChoice --> Perception Modern --> Perception ```

Ancient genomic studies reveal that the alleles responsible for Northern Europe's exceptional stature were introduced approximately 4,700 years ago by Yamnaya steppe pastoralist migrations. While modern nutrition and healthcare allowed populations to reach their full potential, average height in Northern Europe has now hit a genetic plateau. Shapiro argues that humanity readily accepts selective breeding in animals—engineering grey wolves into Chihuahuas or Boxers to perform specific tasks—because humans assign them their roles. With our own species, however, people recoil at the prospect of one generation genetically predetermining the traits or societal niches of the next, because it infringes on our fundamental belief in individual freedom of choice.

- **Yamnaya migrations:** Introduced high-stature genetic variants into Europe roughly 4,700 years ago from the Eurasian steppe. - **Heritability contrast:** Height is genetically tractable and highly heritable, whereas IQ is polygenic, environmentally responsive, culturally biased, and far harder to isolate genetically. - **Societal friction:** The core ethical discomfort with genetic selection in humans stems from removing an individual's autonomy to define their own biological trajectory and societal niche.

[01:36:03](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5763s) Curing Baby KJ and "Playing Human" in a Modified World

While genetic enhancement remains morally contentious, therapeutic somatic gene editing is delivering life-saving breakthroughs. Shapiro highlights the milestone case of "Baby KJ," the first infant successfully cured of a lethal genetic condition using synthetic biology base editing. Baby KJ was born with a severe urea cycle disorder, an inborn error of metabolism that prevented his liver from processing nitrogen, causing toxic ammonia to accumulate rapidly in his bloodstream.

In an unprecedented collaboration spanning academia, the National Institutes of Health (NIH), private biotechnology firms, and the Children's Hospital of Philadelphia, researchers designed a customized CRISPR base editor tailored specifically to Baby KJ's mutation in roughly six months. They developed a targeted delivery vehicle to transport the base-editing machinery directly into his liver cells, conducted safety testing, and administered the bespoke drug three times to the six-month-old infant. The treatment completely corrected the enzymatic defect, enabling the child to survive and live a normal life.

```mermaid flowchart LR accTitle: Baby KJ Therapeutic Base Editing Pipeline accDescr: Step-by-step workflow showing the rapid development and delivery of a personalized CRISPR therapy for urea cycle disorder.

A["Identification of Genetic Defect<br>(Urea cycle disorder / ammonia buildup)"] --> B["Multi-Sector Collaboration<br>(NIH, CHOP, Academia, Industry)"] B --> C["Design Bespoke CRISPR Base Editor<br>(Completed in 6 months)"] C --> D["Liver-Targeted Delivery & Safety Validation"] D --> E["Three Doses Administered at 6 Months Old"] E --> F["Full Metabolic Correction<br>& Normal Life Expectancy"] ```

Huberman notes the striking contrast in public perception: nobody accused Baby KJ's medical team of "playing God." Shapiro argues that the phrase "playing God" is fundamentally misguided. In traditions like Judaism, humans are charged with active stewardship—caring for and repairing the natural world—which makes these interventions an act of "playing human." Humanity has actively directed genetics and altered ecosystems for millennia: - Welcoming wild grey wolf pups into hunter-gatherer camps 30,000 years ago, initiating dog domestication. - Transforming the wild grass teosinte into modern, high-yield agricultural corn through intense artificial selection. - Engineering heat-resilient corals to survive anthropogenic ocean warming. - Developing genetic solutions to rescue endangered native species threatened by destructive invasive pests like cane toads.

Because the modern planet is entirely shaped by human activity, Shapiro concludes that deploying synthetic biology and gene editing to heal human beings and conserve endangered wildlife is not an unnatural overreach, but a direct responsibility in an already human-dominated world.

[01:38:12](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5892s) Inbreeding, Bottlenecks, and the Channel Island Fox

Andrew Huberman opens the conversation by pivoting from human-shaped environments toward carnivores and underwater ecosystems, highlighting the black-footed ferret. He recalls how ferrets are not rodents, but sharp hunters possessing binocular vision. He notes his impression that their population plummeted, allowing prairie dog populations to explode, which decimated grasslands and created severe ecological cascading effects. He also recalls the legendary male ferret nicknamed "Scarface," reputed to have sired hundreds of litters to rescue the population from the brink of extinction. However, Huberman raises a genetic red flag: when a tiny population relies on a single patriarch or very few founders, the resulting kits mate with close relatives. This creates extreme homozygosity, causing harmful recessive alleles to meet and express deformities, sterility, or cognitive deficits.

Beth Shapiro clarifies that while close inbreeding is generally catastrophic—a reason why populations in places like Iceland and Scandinavia maintain exhaustive genealogical registries to track relatedness—there are fascinating exceptions in nature. She points to the Channel Island foxes off the coast of California. These foxes inhabited a confined, stable island habitat devoid of natural predators for so long that their population traversed an extreme evolutionary bottleneck. Over generations, the lethal and harmful recessive mutations were fully expressed and systematically purged from the gene pool. Today, the Channel Island foxes share virtually identical genomes with almost zero genetic diversity, yet they remain outwardly healthy. However, Shapiro cautions that such extreme uniformity carries a grave vulnerability: without genetic diversity, an abrupt ecological change or the introduction of a novel pathogen could wipe out the entire population simultaneously.

[01:41:25](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=6085s) The Matitzi Discovery and Scarface's Legacy

Shapiro outlines the actual history of the black-footed ferret, detailing a cross-institutional rescue effort spearheaded by the U.S. Fish and Wildlife Service, the San Diego Frozen Zoo, and the non-profit organization Revive & Restore (where Shapiro previously served as a board member). Contrary to Huberman's premise, the initial collapse was human-driven: cattle ranchers and farmers viewed prairie dogs as pests and mounted aggressive eradication campaigns. Although meant for the prairie dogs, these poison and culling measures inadvertently decimated the black-footed ferrets that preyed directly upon them.

Captive breeding efforts initially failed because biologists could not determine how to induce ferrets to mate in cages. When both the last captive individual and known wild specimens died, the species was believed completely extinct. It had even been placed on the inaugural endangered species list following the passage of the Endangered Species Act in 1966. Its miraculous rediscovery occurred about a decade later outside Meeteetse, Wyoming, when a family dog named Shep brought a dead animal home. The family brought the carcass to a local taxidermist, who immediately recognized its scientific importance and notified wildlife authorities. Biologists rushed to Meeteetse to study the remnant colony and collected individuals for captive breeding. When disease began striking the remaining wild population, researchers staged an emergency rescue, rounding up every surviving individual they could locate—including the celebrated male "Scarface," distinguished by an actual facial scar, whose breeding vigor provided the foundation for a captive breeding program that now releases approximately 500 ferrets into the wild each year.

```mermaid flowchart TD accTitle: Black-Footed Ferret History and Rescue accDescr: Chronology of the black-footed ferret from near extinction to cloning-assisted genetic rescue.

subgraph Decline ["Historical Decline"] A["Poisoning campaigns targeting prairie dogs"] --> B["Accidental near-extinction of black-footed ferrets"] B --> C["1966: Listed on Endangered Species list; presumed extinct"] end

subgraph Rediscovery ["Rediscovery in Meeteetse, WY"] D["Family dog (Shep) brings in dead ferret"] --> E["Taxidermist identifies species; wild enclave found"] E --> F["Wild disease outbreak forces capture of all survivors"] F --> G["Scarface and small founder group establish captive breeding"] end

subgraph Rescue ["Genetic Rescue & Modern Threats"] G --> H["~500 ferrets released annually, but low diversity"] H --> I["San Diego Frozen Zoo supplies 40-year-old cryopreserved cells"] I --> J["Somatic Cell Nuclear Transfer (SCNT) produces clone Elizabeth Ann (2020)"] J --> K["Subsequent clones successfully reproduce"] K --> L["Current hurdle: Sylvatic plague susceptibility"] end

Decline --> Rediscovery Rediscovery --> Rescue ```

[01:44:09](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=6249s) Somatic Cell Cloning and the Sylvatic Plague Threat

Despite captive breeding successes, the entire living population traces back to a tiny cluster of Meeteetse founders, resulting in dangerously contracted genetic diversity. To restore lost alleles, researchers turned to historical cryopreserved cell lines stored in the San Diego Zoo's Frozen Zoo—derived from the pre-Meeteetse captive population decades earlier. Rather than using Yamanaka factors to force skin cells back into induced pluripotent stem cells (iPSCs), scientists utilized somatic cell nuclear transfer (SCNT), the classical cloning technique used for Dolly the sheep. The nucleus of a cryopreserved somatic cell was placed into an enucleated ferret oocyte, where maternal cytoplasmic proteins in the egg executed natural epigenetic reprogramming.

- **Elizabeth Ann (2020):** The first clone produced from 40-year-old cryopreserved tissue. Although she failed to reproduce due to structural ovarian or induced-ovulation complications, a subsequent clone derived from the same genetic lineage successfully produced offspring, effectively reintroducing long-lost alleles into the living breeding pool. - **The Sylvatic Plague Hurdle:** Despite overcoming breeding and inbreeding hurdles, ferrets released into the wild face catastrophic mortality from sylvatic plague (the bubonic plague bacterium, *Yersinia pestis*). - **The Genetic Solution:** Shapiro notes that domestic pet ferrets are naturally resistant or non-susceptible to plague. Identifying the genetic variants responsible for this immunity could allow researchers to use synthetic biology tools to confer disease resistance to wild black-footed ferrets, ensuring their long-term survival in native habitats.

[01:46:31](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=6391s) Genetic Rescue, Plague Resistance, and Charismatic Species

Colossal Biosciences and allied research teams are currently pursuing multiple genetic hypotheses to protect vulnerable wildlife. One primary effort involves using synthetic biology and genome editing to confer plague resistance to the endangered black-footed ferret. Rather than stopping at simple cloning as a tool of genetic rescue, scientists can actively engineer traits that allow these ferrets to survive in habitats severely disrupted by human activity. Dr. Beth Shapiro highlights that these same tools apply broadly across conservation biology, mentioning their parallel work on the Mauritius pink pigeon, an initiative tied directly to the dodo de-extinction project.

Andrew Huberman jokes about the company's flair for selecting headline-grabbing animals, noting that their roster reads like a curated list of legends: the woolly mammoth, the dodo bird, the pink pigeon, and the dire wolf. Huberman quips that if you cannot manufacture a mythical dragon, a massive ice-age wolf riding the cultural coat-tails of *Game of Thrones* is the next best thing.

Dr. Shapiro laughs and reminisces about working on the first published dire wolf genomes long before she joined Colossal. Back then, her academic team was desperate to coordinate the publication of their dire wolf DNA paper with the premiere schedule of an upcoming *Game of Thrones* season to capture media attention. However, they could not finish sequencing the DNA in time. Because dire wolves lived in warmer regions, their ancient bone remains were far more degraded and poorly preserved compared to subarctic permafrost samples, making high-quality genetic material remarkably difficult to recover.

When Huberman asks whether dire wolf pups were cute rather than born ferocious, Shapiro enthusiastically confirms they were adorable. She connects this to dog domestication: ancestral canines likely began living commensally alongside early human camps, scavenging food scraps and alerting humans to approaching megafauna like giant cave bears with their howls. Over time, mutual tolerance and our innate affinity for cute, round-eyed puppies cemented the human-canine bond, eventually leading to artificial selection for designer traits like doodle coats and hypoallergenic fur.

[01:49:00](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=6540s) Modeling Ecosystems: Digital Twins and CARE Reports

Huberman observes the profound paradox in human behavior: our society casually modifies domestic animals to suit household conveniences—such as breeding non-shedding dogs to avoid hair on furniture—yet remains deeply apprehensive about ecological reintroductions. He argues that the overwhelming complexity of ecosystems, which easily overwhelms any human ecologist attempting to mathematically model every interaction among flora, fauna, water tables, and climate, could be addressed by modern artificial intelligence running round-the-clock computational simulations.

Shapiro agrees, bringing up the concept of "digital twins" in ecology. Just as researchers in human medicine are constructing digital twins of specific organ systems to simulate how a targeted intervention or drug might perturb the entire body, computational biologists can build foundational ecosystem models to predict ecological shifts before any gene-edited or de-extinct species is introduced into the wild.

```mermaid flowchart TD accTitle: Ecological Impact Assessment Framework accDescr: Workflow showing digital twins and CARE reports informing ecological reintroductions.

subgraph Modeling ["1. Computational Simulation"] A["Environmental Parameters\n(Climate, Seasons, Habitats)"] B["Species Dynamics\n(Predator-Prey, Vectors)"] A & B --> C["AI 'Digital Twin' Model"] C --> D["Ecosystem Perturbation Analysis"] end

subgraph Evaluation ["2. Empirical Fieldwork & Stakeholder Input"] E["Local Stakeholder Dialogue"] F["Conservation Biologist Assessments"] E & F --> G["CARE Report\n(Short, Medium, Long-Term Impacts)"] end

subgraph Action ["3. Implementation"] D & G --> H["Informed, Ethical\nSpecies Reintroduction\n(e.g., Bluebuck, Thylacine)"] end ```

To govern real-world applications, Colossal relies on an independent team tasked with drafting extensive ecological assessments known as CARE reports:

- **CARE Reports**: Deep-dive impact assessments compiled prior to the release of any candidate species (such as the bluebuck). - **Time Horizons**: Every report evaluates potential ecological shifts across short-, medium-, and long-term windows. - **Stakeholder Integration**: Findings are generated in partnership with local communities, conservation biologists, and ecological experts to quantify and mitigate ecological risk before animals are returned to native habitats.

[01:50:58](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=6658s) Human Gene Editing, Moral Thresholds, and Delivery Systems

Turning to human genetics, Huberman predicts that within three to five years, gene-editing interventions—such as modifying the CCR5 receptor to confer HIV resistance or excising severe monogenic disease variants during fertility treatments—will become widely accepted. Even outside progressive tech bubbles, parents fundamentally desire to spare their children debilitating hereditary illnesses.

Shapiro references the final chapter of her book, *Life as We Made It*, where she examines the psychological thresholds that govern when humans will turn gene-editing tools upon themselves. She posits a crisis scenario, such as an acute pandemic where individuals carrying a specific genetic variant face certain death. In such an emergency, editing human genomes—an act historically labeled by many as morally reprehensible—would overnight become the sole ethical mandate to save human lives.

Huberman and Shapiro note that public adoption of controversial biotechnology hinges heavily on familiarity and user-friendly delivery mechanisms:

- **Assisted Reproduction**: Intracytoplasmic sperm injection (ICSI) involves an embryologist hand-selecting an individual sperm to inject directly into an egg. While initially controversial because it bypassed natural selection ("the sperm race"), it became widely embraced once patients recognized its utility in overcoming severe male infertility. - **The GLP-1 and Peptide Analogy**: Huberman points out that the explosive popularity of GLP-1 weight-loss medications erased widespread needle phobia simply because the medication was packaged inside an intuitive, push-button pen injector rather than an intimidating hypodermic syringe. - **Tech Friction**: Just as personal computers shifted from forbidding, room-sized mainframe machines to frictionless pocket smartphones and cameras, public fear of novel biological technologies often dissipates once the interface becomes non-threatening and convenient.

[01:54:31](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=6871s) Artificial Wombs and Translational Technologies

Reflecting on how societal anxieties shift over time, Andrew Huberman and Dr. Beth Shapiro note that initial panic around radical technologies tends to evaporate once the technology becomes familiar, non-invasive, and well-communicated. Much like computers or future non-invasive brain-machine interfaces—which will no longer evoke fears of skull-drilling mind control—the "fear wall" surrounding synthetic biology can drop to zero. Shapiro jokingly suggests that the quickest way to dissolve apprehension might just be to let everyone "pet a dire wolf just once, just a little bit." When Huberman enthusiastically responds that he would love to pet one, especially a pup, Shapiro invites him to tour the Colossal Biosciences laboratory to see their research firsthand, including artificial wombs and artificial bird eggs.

Huberman admits that the term "artificial wombs" will inevitably terrify the public and asks Shapiro to demystify what that looks like in practice. Currently, Shapiro explains, the lab tests these systems using mice. The logistical necessity for de-extinction is clear: resurrecting and scaling an ecologically meaningful herd of woolly mammoths cannot rely on impregnating a hundred endangered Asian elephants with 22-month gestations. "Elephants should be allowed to make elephants," Shapiro emphasizes. Developing artificial wombs allows researchers to gestate multiple mammoths simultaneously without burdening living surrogate mothers.

Critically, this de-extinction-driven engineering has profound translational benefits for human medicine. Shapiro points to real-world medical crises, sharing the story of a friend diagnosed with breast cancer while pregnant who faced an excruciating choice: delay lifesaving cancer therapy until delivery, or start chemotherapy immediately and risk severe harm to her fetus. A functional artificial womb could allow a baby to be safely transferred out of the mother to complete development ex utero, allowing the mother to begin treatment months earlier, or permit delicate fetal surgeries impossible inside the maternal body. Huberman compares this to modern neonatal intensive care units (NICUs)—quiet, darkened rooms where extremely premature infants are nurtured to full term. Shapiro agrees that artificial wombs are essentially the next evolution of the NICU, synthesized with advanced developmental biology, genetics, and epigenetics.

```mermaid flowchart TD accTitle: De-Extinction Technology Dual-Use Pipeline accDescr: Diagram illustrating how Colossal's core genetic technologies feed into de-extinction, conservation, and human medicine.

subgraph CoreTech["Core Synthetic Biology Toolkit"] A["Artificial Wombs & Eggs"] B["Cloning & Genetic Engineering"] C["Comparative Genomics & Epigenetics"] end

subgraph Applications["Downstream Applications"] D["De-Extinction<br/>(Mammoths, Dire Wolves)"] E["Wildlife Conservation<br/>(Cloning Red Wolves with >75% Ancestry)"] F["Human Healthcare<br/>(Advanced NICU, Fetal Care during Maternal Cancer)"] end

A --> D A --> F B --> D B --> E C --> E C --> F ```

[01:57:38](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=7058s) The Pioneer's Burden and Conservation Dual-Use: Red Wolves

Pioneering research inevitably attracts public backlash and accusations of elitism or misplaced priorities. Huberman relates this to a recent episode featuring the principal of Alpha School, where students learn on iPads via adaptive AI tutors for just two hours a day to clear knowledge gaps before spending the rest of their time learning practical skills like farming and entrepreneurship. While some celebrated the model, critics immediately framed it as a luxury reserved for the wealthy, despite scholarship programs designed to democratize it. Similarly, de-extinction critics frequently demand to know why scientists are not spending their time and money curing cancer or protecting currently endangered species instead.

Shapiro firmly pushes back against the premise that de-extinction detracts from saving living animals: "There is not enough money in conservation. There just isn't." Rather than draining funds, de-extinction attracts entirely new venture capital, fresh technological toolsets, and younger generations of enthusiastic scientists into the conservation sphere. Furthermore, the tools developed for de-extinction are deployed directly to living, endangered species on a daily basis.

As a primary example, Shapiro reveals that alongside their dire wolf announcement, Colossal announced that they had cloned red wolves—North America's most critically endangered endemic wolf species, which currently survives in a tiny, severely bottlenecked captive population in North Carolina. Collaborating with Dr. Bridgett vonHoldt at Princeton University, researchers identified wild, coyote-like canids carrying massive amounts of red wolf ancestry—some exceeding 75%. Using the exact same cloning toolkit developed to bring back the dire wolf, Colossal cloned these high-ancestry canids to inject vital new genetic diversity back into the struggling red wolf population. When Huberman admits he had not heard about the red wolf cloning, Shapiro highlights the irony: the public and media obsess over the headline-grabbing de-extinction project while completely overlooking the parallel conservation rescue happening simultaneously.

- **Asian Elephant Gestation:** 22 months, underscoring why surrogate pregnancies cannot scale a mammoth population. - **Red Wolf Genetic Status:** Endemic to North America; surviving in extremely low numbers in the Carolinas; boosted by cloning wild hybrid canids carrying >75% red wolf ancestry. - **Cross-Disciplinary Cancer Insights:** Research into elephant biology and genetics (such as tumor-suppressor gene copy numbers) yields incidental insights into human oncology, even when cancer research is not the primary institutional mission.

[02:01:26](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=7286s) Scientific Obsession: Why Pioneers Must Follow Their Drive

Huberman and Shapiro explore the personality traits required to make foundational leaps in science and technology. Having reviewed numerous grant applications for the National Institutes of Health (NIH), Huberman observes that science is full of pedestrian, "crank-turning" projects that incrementally advance existing frameworks. While those have their place, the scientists who generate transformative breakthroughs are driven by an obsessive, intense fascination with high-risk, boundary-pushing questions.

Attempting to force an ambitious pioneer onto a standard societal checklist misses the essence of human creativity. Huberman uses the analogy of Elon Musk's obsession with reaching Mars: critics often argue he should redirect all his resources to fixing terrestrial problems, but that is equivalent to demanding that "Metallica should be the Grateful Dead." Artists and innovators operate from their authentic spirit; demanding that they work on something else destroys the very obsession that drives progress. Historical icons like Howard Hughes accomplished feats in aviation precisely because they were deeply fixated on their specific vision, and pushing the boundaries of biology requires that same relentless, individual passion.

[02:02:44](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=7364s) Science Communication and Public Education at Colossal

When reflecting on conservation priorities, both Huberman and Shapiro emphasize the necessity of deep specialization over trying to fix every ecological challenge simultaneously. Huberman notes that while some people critique researchers for focusing on mammoths instead of coral reefs, genuine progress requires individuals who are fanatically obsessed with their specific domain. Shapiro agrees, noting that if people attempt ten distinct projects instead of focusing on one, their real-world impact drops dramatically. Furthermore, Huberman stresses that it only takes a small cohort of passionate young minds enchanted by biology to alter the trajectory of a scientific discipline.

Huberman then asks how Colossal Biosciences approaches public outreach and how the organization is built. Shapiro explains that Colossal employs approximately 120 scientists alongside dedicated media and production staff. To bridge the gap between bench science and the broader public, the company works across multiple communication channels:

- Running an extensive social media apparatus producing bite-sized science updates customized for diverse audiences. - Collaborating with documentary teams, filmmakers, and podcast platforms. - Disseminating scientific findings through both traditional peer-reviewed journal publications and rapid preprint servers like bioRxiv. - Delivering live community lectures through Shapiro's work as a National Geographic Explorer, speaking publicly about genetic rescue, conservation, and a future where human presence coexists with flourishing biodiversity.

[02:05:16](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=7516s) Beth Shapiro's Science Origin Story: From Broadcast Journalism to Rhodes Scholar

When Huberman asks whether Shapiro always intended to shake up old academic traditions—recalling his own impressions of Cambridge steeped in Darwinian portraits—she admits her path into science was unconventional. She entered the University of Georgia as a broadcast journalism major, having already worked at a local television station in Northwest Georgia doing morning cut-ins on Headline News at 24 and 54 minutes past the hour. As a college freshman, she served as news director for a local radio station, enduring 4:00 a.m. shifts to write copy for drive-time radio broadcasts while living in a dormitory with shared communal bathrooms.

```mermaid flowchart TD accTitle: Path from Journalism to Ancient DNA Research accDescr: Diagram tracing Beth Shapiro's career evolution from student journalist to ancient DNA pioneer at Oxford.

subgraph UGA["University of Georgia"] A["Broadcast Journalism & Radio News"] --> B["9-Week Geology & Archaeology Road Course"] B --> C["Shift to Science: Ecology & Parasitoid Wasps"] end

subgraph Transition["International Fellowships"] C --> D["Fieldwork at Barro Colorado Island, Panama"] D --> E["Scholarship Application Package"] E -->|Missed Marshall / Won Rhodes| F["Oxford University"] end

subgraph Oxford["Ancient DNA Pioneer"] F --> G["Joined Alan Cooper's Lab"] G --> H["Paleogenomics & Siberian Fieldwork"] end ```

Her trajectory shifted after completing a transformative nine-week honors course traversing the United States. Traveling from the East Coast to the Pacific and back while camping in national parks, she studied mineralogy, coastal dynamics, glacial scars, and archaeological ruins showcasing ancient human impacts on environments. Realizing she wanted to tell stories about human-ecosystem interactions, she naively decided to learn science to become a science journalist. That curiosity led her to Barro Colorado Island in Panama, studying population ecology in parasitoid wasps. Together with a mentor moving to Edinburgh, she designed a PhD proposal exploring whether wasps alternate between inbreeding and outbreeding as a pressure test to purge deleterious alleles from their genomes. Because she required external funding, the University of Georgia had her apply for an entire slate of competitive awards. Although she failed to secure an interview for the Marshall Scholarship to Edinburgh, she was awarded a Rhodes Scholarship to the University of Oxford.

[02:08:24](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=7704s) Entering Ancient DNA and the Myth of Dinosaurs

Arriving at Oxford without a fixed project, Shapiro crossed paths with Alan Cooper, a New Zealander who was setting up one of the world's very first dedicated ancient DNA clean labs. The emerging discipline immediately resonated with her: it synthesized geology, paleontology, and environmental storytelling. Reading degraded genetic sequences extracted from extinct ecosystems made it possible to reconstruct how climate warming at the end of the last ice age or early human migrations altered planetary biodiversity. When Cooper sealed his pitch with an offer to send her to Siberia to collect specimens, she committed instantly.

Whenever paleogenomic researchers publish high-profile discoveries, Shapiro notes, popular media inevitably asks the exact same question: "So, what does this mean about how close we are to bringing dinosaurs back to life?" While researching her second book via the New York Times archives, Shapiro tracked this obsession to the birth of the field in 1984. Researchers in the Extinct Species Study Group at UC Berkeley used molecular cloning in the pre-PCR era to extract and clone a tiny fragment of DNA from the salt-preserved hide of an extinct quagga (a South African subspecies of zebra). While proving the quagga was closely related to modern zebras was evolutionary common sense, the revelation that genetic material could survive post-mortem launched both paleogenomics and modern forensic DNA analysis.

[02:11:05](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=7865s) Why the Public Gravitates to Mammoths Over Dinosaurs

Allan Wilson, recognized as the pioneer who published the very first ancient DNA paper, earned the distinction of being the first person confronted with "the dinosaur question." Andrew Huberman notes that walking into the Life Sciences Building at UC Berkeley immediately greets visitors with a full-size *Tyrannosaurus rex* skeleton. While Huberman admits he personally has never been dinosaur-obsessed—finding living animals and human disease biology considerably more compelling—he recognizes that demanding dinosaur cloning is essentially the paleontology equivalent of asking biomedical researchers, "Why don't you cure cancer?"

Beth Shapiro explains that once people are informed that dinosaurs cannot be brought back because no dinosaur DNA survives, their curiosity immediately pivots to two specific Ice Age beasts: the woolly mammoth or the saber-toothed cat. The psychological drive behind this fascination comes down to sheer physical scale and human connection. Unlike dinosaurs, mammoths coexisted with humans; our ancestors hunted them, their extinction occurred relatively recently, and they remain vivid in our shared cultural imagination. Shapiro observes that while humans generally dislike feeling small, mammoths inspire a sense of awe and scale that people can genuinely appreciate.

[02:12:10](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=7930s) Dire Wolves, Ecological Restoration, and Shapiro’s Scientific Leap

Huberman reflects on the public perception surrounding genetic rescue and de-extinction. Most people want what is best for both humanity and other species, but unfamiliar biotechnologies naturally provoke apprehension based on what the public does not yet understand. Addressing Shapiro’s work at Colossal Biosciences, Huberman highlights the dire wolf project, contrasting substantial de-extinction science with superficial laboratory demonstrations:

> "This is not like taking some human cells from the cortex and putting them into a mouse cortex. Like those are cutesy experiments. Frankly, I thought those experiments were more like cutesy derivative. They didn't really inform or anything in my opinion. But what you guys did, I thought was really cool."

Huberman emphasizes the larger mission of repairing and enhancing degraded ecosystems and expresses deep admiration for Shapiro's dedication. He points out that she chose to step away from an exceptionally prestigious academic standing—including a fully thriving research laboratory and an appointment as a Howard Hughes Medical Institute (HHMI) Investigator, an accolade very few scientists ever achieve—in order to lead these de-extinction and conservation efforts at Colossal. Huberman notes how rare and invigorating it is to weave through conversations spanning black-footed ferrets, woolly mammoths, dinosaurs, and human gene editing in a single sitting.

[02:13:42](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=8022s) Closing Remarks and Huberman Lab Resources

Wrapping up the episode, Huberman expresses his gratitude to Dr. Beth Shapiro and directs listeners to check the episode show notes to learn more about her research and conservation initiatives. He outlines zero-cost ways to support the podcast:

- **Channel Subscriptions & Follows:** Subscribe to the *Huberman Lab* YouTube channel, and follow the show on Spotify and Apple Podcasts. - **Reviews & Feedback:** Leave up to a five-star review and write comments or suggestions on Apple Podcasts, Spotify, or in the YouTube comment section, which Huberman actively reads to source future guest and topic ideas. - **Sponsors:** Support the partners and sponsors highlighted during the episode, which directly enables the continuation of the show. - **Social Media:** Follow `@hubermanlab` across Instagram, X, Threads, Facebook, and LinkedIn for distinct scientific breakdowns, protocols, and educational tools that extend beyond podcast episodes. - **Neural Network Newsletter:** Access the free monthly newsletter by visiting `hubermanlab.com`, opening the top-right menu, and providing an email address (which is never shared). The newsletter provides comprehensive episode summaries and actionable 1-to-3-page protocol PDFs covering topics such as sleep optimization, dopamine regulation, deliberate cold exposure, and foundational cardiovascular and resistance exercise regimens.

Huberman closes by thanking the audience for their time, attention, and continued interest in science.

## Notable quotes > [02:35](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=155s) Biology doesn't care what species you are. Species is a human concept. — Beth Shapiro

> [10:48](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=648s) if they can, they do. — Beth Shapiro

> [37:26](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=2246s) are essentially recreating their ecosystem just by being there. — Beth Shapiro

> [55:41](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=3341s) If it looks like a dire wolf and it's able to fill the niche of a dire wolf, I'm happy to call it a dire wolf. — Dr. Beth Shapiro

> [01:25:30](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5130s) Doing nothing is not not deciding. Doing nothing is saying we accept the fact that we are going to have a future that is less biodiverse than the present. — Beth Shapiro

> [01:29:13](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5353s) As long as we're wading into deep water here, let's talk about the really deep water, which is humans. — Beth Shapiro

> [01:37:15](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5835s) playing God

> [01:37:25](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=5845s) playing human — Beth Shapiro

> [01:54:31](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=6871s) Elephants should be allowed to make elephants — Beth Shapiro

> [01:57:38](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=7058s) There is not enough money in conservation. There just isn't. — Beth Shapiro

> [02:12:10](https://www.youtube.com/watch?v=SFX8FIHFLE4&t=7930s) This is not like taking some human cells from the cortex and putting them into a mouse cortex. Like those are cutesy experiments. Frankly, I thought those experiments were more like cutesy derivative. They didn't really inform or anything in my opinion. But what you guys did, I thought was really cool. — Andrew Huberman

## Mentioned AG1, Alan Cooper, Allan Wilson, Alpha School, Andrew Huberman, Antonio Regalado, Baby KJ, Barro Colorado Island, Bridgett vonHoldt, Broad Institute, Carl Linnaeus, Cesar Millan, Children's Hospital of Philadelphia (CHOP), Colossal Biosciences, Dr. Beth Shapiro, Ed Green, Eight Sleep, Elinor Karlsson, Elon Musk, Ernst Mayr, Extinct Species Study Group, Function, Game of Thrones, Howard Hughes, Howard Hughes Medical Institute (HHMI), How to Clone a Mammoth, International Summit on Human Genome Editing, Jared Rutter, Joovv, Leslie Vosshall, Life as We Made It, National Geographic, National Institutes of Health (NIH), Natural History Museum of Denmark, Ngāi Tahu Research Centre, Nikita Zimov, Pleistocene Park, Princeton University, Revive & Restore, San Diego Frozen Zoo, Sergey Zimov, Svante Pääbo, U.S. Fish and Wildlife Service, UC Berkeley, USDA, University of California, Santa Cruz, University of Georgia, University of Massachusetts (UMass), University of Oxford, bioRxiv

## Video description Dr. Beth Shapiro, PhD, is an evolutionary biologist and Chief Science Officer at Colossal Biosciences. Her work focuses on de-extinction and wildlife conservation efforts. We discuss genetic differences among humans, and how ancient DNA and modern embryology are being used to de-extinct and protect woolly mammoths, dodo birds, and dire wolves, as well as to help conserve endangered species. We also explore the ethical implications of de-extinction and how synthetic biology can help build a more bio diverse and resilient world.

Show notes: https://go.hubermanlab.com/JKtj3zr

Thank you to our sponsors AG1: https://drinkag1.com/huberman Joovv: https://joovv.com/huberman Eight Sleep: https://eightsleep.com/huberman Function: https://functionhealth.com/huberman

Huberman Lab Instagram: https://www.instagram.com/hubermanlab Threads: https://www.threads.net/@hubermanlab X: https://x.com/hubermanlab Facebook: https://www.facebook.com/hubermanlab TikTok: https://www.tiktok.com/@hubermanlab LinkedIn: https://www.linkedin.com/in/andrew-huberman

Dr. Beth Shapiro Colossal Biosciences: https://colossal.com/team/beth-shapiro-ph-d-3 Academic profile: https://directory.ucsc.edu/cd_detail?guid=G024262336 National Geographic: https://explorers.nationalgeographic.org/directory/beth-shapiro Lab: https://pgl.soe.ucsc.edu Publications: https://scholar.google.com/citations?user=8Mv9l1oAAAAJ LinkedIn: https://www.linkedin.com/in/beth-shapiro-27344222 X: https://x.com/bonesandbugs

Timestamps 00:00:00 Beth Shapiro 00:02:35 What is a Species?, Taxonomy, Bison 00:09:13 Neanderthals, Denisovans, Homo Sapiens 00:12:38 Sponsors: Joovv & Eight Sleep 00:15:27 Hybrid Ancestry, “Grolar” Bears 00:20:30 Homo Sapiens & Neanderthal Interbreeding, Genes; Denisovans 00:25:53 Neanderthal Genes, Immunity, Red Hair; Eye Color 00:30:17 De-Extinction, Species Selection, Woolly Mammoths 00:38:08 Sponsor: AG1 00:39:21 Bird De-Extinction, Dodo; Reproduction & Genes 00:47:40 Development Biology, Woolly Mammoth, Elephants 00:54:49 Dire Wolf, Synthetic Biology, Ethics 01:03:26 De-Extinction, Ecology, Conservation, Ethics 01:09:22 Ecosystem Resilience, Thylacine; Preventing Extinction, Quolls 01:15:45 Sponsor: Function 01:17:23 Modeling Ecological Impact, Mosquitoes, Gene Drives; Panthers 01:25:50 Advisory Panels, Synthetic Biology Education 01:29:13 Genetic Selection in Humans, Human-Shaped World 01:38:25 Black-Footed Ferrets, Genetic Rescue 01:47:05 Dire Wolf; Ecological Modeling, New Technology & Public Fear 01:55:09 Artificial Wombs; Current Issues, Conservation & Red Wolf 02:01:26 Science Pioneers; Colossal Public Education 02:04:31 Beth’s Science Origin Story; Dinosaurs 02:13:42 Zero-Cost Support, YouTube, Spotify & Apple Follow, Reviews & Feedback, Sponsors, Social Media, Neural Network Newsletter

Disclaimer & Disclosures: https://www.hubermanlab.com/disclaimer

[Source](https://www.youtube.com/watch?v=SFX8FIHFLE4)

中文简报

Colossal Biosciences工程化改造恐狼以推动野生动物拯救 Colossal首席科学官Beth Shapiro认为,出于规避风险而拒绝合成生物学必将导致生物多样性丧失,因此需要将为灭绝物种复活开发的基因编辑工具用于积极拯救受威胁的生态系统。 Beth Shapiro博士对经典分类学进行了深度剖析,解释说物种边界是实用的行事人为构建,而非绝对严格的生物学界限,早期古人类杂交以及杂交动物便是明证。她概述了Colossal Biosciences的灭绝物种复活计划,阐述了如何通过对近缘现生物种进行靶向基因编辑,在无需从头合成已灭绝基因组的情况下,实现猛犸象、渡渡鸟和恐狼等性状的表型复活。Shapiro强调,支撑灭绝物种复活的技术(包括体细胞核移植、多重编辑和人造子宫)具有双重用途,是北袋鼬和黑足雪貂等濒危野生动物基因拯救的关键所需。最终,讨论重塑了合成生物学的定位:它并非是在“扮演上帝”,而是在生态退化的世界中人类履行管理职责所必需的主动框架。 灭绝物种复活工作在功能上与现代基因拯救流程没有区别,二者在测序、基因组编辑和辅助生殖中使用完全相同的工具集来保护极度濒危物种。 (0:00) Colossal Biosciences通过在灰狼基因组中引入20个靶向基因编辑,培育出了三只活体工程化恐狼——同卵双胞胎Romulus和Remus,以及雌性Khaleesi。 (55:41) DNA在远未达到6600万年之前就已完全降解,这使得非鸟类恐龙的复活在物理上成为不可能;已回收的最古老哺乳动物DNA大约跨越100万至200万年。 (30:17) 合成生物学能够迅速化解生态威胁,例如通过在北袋鼬基因组中引入单个点突变,即可在体外赋予其对入侵物种海蟾蜍蟾毒素的耐受性。 (73:24)

Reading summary

Dr. Beth Shapiro argues that de-extinction is not an exercise in creating identical ancient copies, but an applied engine for ecological restoration and genetic rescue. By engineering key functional traits into modern proxies, synthetic biology platforms aim to stabilize fragile habitats while directing funding and tools toward endangered wildlife. Functional Traits Over Genetic Gatekeeping (52:19) Rather than attempting to clone an exact ancient specimen, Colossal Biosciences focuses on identifying and restoring core functional traits. Dr. Shapiro dismisses rigid genetic species definitions, pointing out that ancient woolly mammoths naturally differed from one another by millions of base pairs. The objective is to produce cold-tolerant elephants capable of repopulating the Arctic mammoth steppe and enduring contemporary microbes, climates, and surrogate gestations. This approach was operationalized in the dire wolf project. By sequencing fossil remains, researchers isolated mutations responsible for heavier bone density, larger stature, and lighter coat pigmentation. They engineered 20 specific edits into the modern gray wolf genome to resurrect the dire wolf phenotype, producing three living canids: twin males Romulus and Remus, and a female named Khaleesi. Dual-Use Technology for Genetic Rescue (73:24) Shapiro counters critiques that de-extinction diverts funding from living species by stating that both goals depend on identical sequencing, cloning, and gene-editing infrastructure. Flagship ancient candidates attract new capital and scientific talent that are immediately deployed toward active conservation efforts, including the recent cloning of critically endangered North American red wolves. In Australia, Colossal is using synthetic biology to protect the endangered northern quoll from toxic invasive cane toads. By copying a single nucleotide substitution found in toad-resistant mammals on other continents, researchers introduced a point mutation into the quoll genome to confer physiological resistance. Similarly, researchers are pursuing gene edits and cryopreserved cell lines to provide black-footed ferrets with resistance to sylvatic plague. Restoring Keystone Species and Ecological Health (36:10) The broader motivation behind reviving extinct lineages is the restoration of keystone ecological roles. In northern latitudes, megaherbivores suppress insulating snowpack, exposing frozen soils to freezing air and preventing rapid permafrost thaw. Data from Sergey and Nikita Zimov's Pleistocene Park demonstrate that grazing and trampling by proxy herbivores prevent shrub encroachment and support productive grassland mosaics. Apex predators similarly structure ecosystems. In Tasmania, the extinction of the thylacine removed an apex regulator, leaving the inbred Tasmanian devil population vulnerable to the unchecked transmission of devil facial tumor disease (DFTD). Shapiro notes that healthy apex predators naturally cull sick individuals, preventing transmissible pathology from decimating host populations. Regulatory Restraints, Scaling, and Public Perception (63:56) Reintroducing engineered organisms requires strict compliance with Institutional Animal Care and Use Committees (IACUC) and multi-agency regulatory processes. To address the ecological complexity of releases, researchers rely on computational AI 'digital twins' to model trophic and environmental cascades before animals enter natural habitats. Projects also interface directly with regional groups, such as the Māori Ngāi Tahu Research Centre for the New Zealand moa project. Physical scaling presents another bottleneck. Because researchers reject impregnating dozens of endangered Asian elephants with 22-month gestations, Colossal is developing ex-vivo artificial wombs, currently tested in mice, to gestate future mammoth herds without straining living surrogate species. While somatic base editing and synthetic biology demonstrate clear therapeutic and conservation breakthroughs, human germline modifications and wild reintroductions remain bounded by ethical controversies, evolutionary backlashes like drive resistance, and long-term regulatory hurdles.

Source quotes

[2:35] Beth Shapiro: Biology doesn't care what species you are. Species is a human concept. [10:48] Beth Shapiro: if they can, they do. [37:26] Beth Shapiro: are essentially recreating their ecosystem just by being there. [55:41] Dr. Beth Shapiro: If it looks like a dire wolf and it's able to fill the niche of a dire wolf, I'm happy to call it a dire wolf. [85:30] Beth Shapiro: Doing nothing is not not deciding. Doing nothing is saying we accept the fact that we are going to have a future that is less biodiverse than the present. [89:13] Beth Shapiro: As long as we're wading into deep water here, let's talk about the really deep water, which is humans. [97:15] playing God [97:25] Beth Shapiro: playing human [114:31] Beth Shapiro: Elephants should be allowed to make elephants [117:38] Beth Shapiro: There is not enough money in conservation. There just isn't. [132:10] Andrew Huberman: This is not like taking some human cells from the cortex and putting them into a mouse cortex. Like those are cutesy experiments. Frankly, I thought those experiments were more like cutesy derivative. They didn't really inform or anything in my opinion. But what you guys did, I thought was really cool.

Original transcript

[0:00] So our direwolves, they have 20 edits [0:03] that we picked and we sequenced genomes [0:05] from fossil direwolves. We learned from [0:08] those genomes what genetic changes made [0:11] those animals bigger, more robust, light [0:13] colored in coat and then we engineered [0:16] those changes into a greywolf genome to [0:18] recreate the direwolf. You know, I often [0:20] get the question of why are you thinking [0:22] about bringing extinct species back to [0:24] life? Why aren't you thinking about [0:26] helping living species not become [0:28] extinct? And the answer is we are doing [0:31] both. It is the same tools. It's the [0:34] same technology. It's the same needs. [0:37] And when we excite people with the idea [0:41] of mammoths and dodos and thyloines, we [0:44] get more engagement and enthusiasm and [0:46] investment in developing the technology [0:48] that we can use to stop living species [0:50] from becoming extinct. [0:52] >> Welcome to the Huberman Lab podcast, [0:54] where we discuss science and [0:56] science-based tools for everyday life. [1:01] I'm Andrew Huberman and I'm a professor [1:03] of neurobiology and opthalmology at [1:06] Stanford School of Medicine. My guest [1:08] today is Dr. Beth Shapiro. Dr. Beth [1:11] Shapiro is an evolutionary biologist. [1:13] She was a professor at UC Santa Cruz and [1:16] an investigator with the Howard Hughes [1:17] Medical Institute before leaving to [1:19] become chief scientific officer at [1:21] Colossal Biosciences. Her work at [1:24] Colossal is focused on what is called [1:25] deextincting species such as the woolly [1:28] mammoth, the dodo bird, and the [1:29] direwolf, meaning bringing them back to [1:32] life. But that entire initiative is also [1:34] about species preservation more broadly [1:36] and how genomics can be used to improve [1:38] the global ecosystem. In this episode, [1:40] we discuss what it means to use ancient [1:43] DNA to bring back extinct species, which [1:45] then led us to a broader discussion [1:47] about genetic engineering in human [1:49] health, both of which, by the way, are [1:51] happening right now. So, this is not [1:53] just a projection into what's coming in [1:54] the future. As you'll see, Dr. Beth [1:56] Shapiro is truly a one-of-a-kind [1:58] thinker. And today, you'll learn the [2:00] science, the ethical implications, and [2:02] the positive potential of using genetics [2:04] to de-extinct species and using genetic [2:07] selection and genetic tools to change [2:10] humans. And no, Dr. Beth Shapiro is not [2:12] planning to bring back dinosaurs. And [2:14] today, you'll learn why. Before we [2:16] begin, I'd like to emphasize that this [2:18] podcast is separate from my teaching and [2:20] research roles at Stanford. It is [2:21] however part of my desire and effort to [2:23] bring zero cost to consumer information [2:25] about science and science related tools [2:27] to the general public. In keeping with [2:29] that theme, today's episode does include [2:31] sponsors. And now for my discussion with [2:33] Dr. Beth Shapiro. Dr. Beth Shapiro, [2:36] welcome. [2:37] >> Thank you. [2:38] >> Longtime fan of your work. [2:39] >> Same. [2:40] >> Love animals. Love stories about animals [2:42] that aren't around anymore. heard that [2:45] you're going to bring back the woolly [2:46] mammoths, the dodo bird, and that you [2:48] might have already done something to [2:50] contribute to the proliferation of the [2:51] blackfooted ferret. I'm a big fan of [2:54] muselids, of which ferrets are. We're [2:56] going to talk about all of that today, [2:57] including the ethical implications and [2:59] so on. But I have a very basic question, [3:02] which is how do you decide what a [3:06] species is? Because you have a degree in [3:08] zoology. I always wanted to get a degree [3:10] in zoology but a few years ago we got [3:13] this thing called DNA sequencing. We can [3:15] look at ancient DNA can look at [3:17] skeletons. People have done that for a [3:19] long time and my understanding is that [3:21] it's completely revised the [3:23] understanding of the relationship [3:25] between different animals and the number [3:26] of branches in these phoggenetic trees. [3:30] So, what have we learned that you think [3:32] people might appreciate understanding [3:33] about taxonomy and like a is my dog as a [3:37] bulldog mut [clears throat] [3:39] as a Chihuahua? Are they really the same [3:41] species? [3:42] >> Right? That's a really fascinating way [3:44] to put it. And I think the most [3:46] important thing that most people [3:48] probably don't think about is that [3:51] biology doesn't care what species you [3:54] are. Species is a a human concept. We [3:58] have this incredible proclivity to want [4:00] to put things into boxes so that we can [4:03] talk about them so that we can have [4:05] conversations or share stories or share [4:08] memories. In order to share something, [4:10] we have to know what to call it. That's [4:11] one of the reasons language has been so [4:13] fundamental to the evolution of our [4:15] species and our social structures. So, [4:18] what is a species? probably when you [4:20] learned about species in biology class [4:22] when you were in middle school you [4:24] learned about Ernst Mar's biological [4:26] species concept [4:27] >> kingdom film order genus species like [4:30] this kind of thing clay you [4:31] >> know that's the taxonomy right so we [4:33] have a lanaeus came up with this idea of [4:35] doing taxonomy right so here's an [4:37] interesting taxonomy story I've I've [4:39] spent a lot of my career working on [4:41] bison for unfortunate reasons probably [4:44] or fun reasons or whatever but a lot of [4:46] time working on bison and bison were [4:48] called buffalo buffalo right we think of [4:50] American bison as buffalo it's the same [4:52] thing the same thing but bison is the [4:55] taxonomic name that was given to [4:57] American buffalo by Carl Lanaeus because [5:00] when Europeans were going around the [5:02] world and finding for the first time [5:04] Europeans had seen all these different [5:06] animals if they saw a big animal that [5:08] looked like it would make a good coat [5:11] that was called a boof coat they called [5:14] it a buffalo or a buffalo right so we [5:17] have African buffalo buffalo, an Asian [5:18] buffalo, an American buffalo, and they [5:20] are not related to each other at all if [5:22] you look at their DNA, but they all have [5:24] the same name because they all made a [5:27] good coat at some point, or at least [5:29] there was the idea that they would. But [5:31] taxonomists found this to be very [5:34] disturbing. We want to know what animal [5:37] we're talking about when we say the [5:39] buffalo. And so this is why Carlaeus [5:42] comes up with this scheme. The American [5:44] bison, the American buffalo is called [5:45] bison bison. In fact, the plains bison [5:48] is called bison bison bison. That's a [5:50] genus and a species and a subspecies [5:52] that are all the same thing. [5:53] >> That's the Latin name bison bison bison. [5:55] >> Bison bison bison. [5:56] >> It's almost as humorous as I think it's [5:58] gorilla gorilla for the gorilla. [6:00] >> Gorilla gorilla and llama llama. That's [6:01] one of my favorites, too. [6:02] >> Love it. [6:03] >> Anyway, taxonomy. So, we have these [6:05] taxonomic ways of thinking about things [6:06] and that sorts everything into your deep [6:08] evolutionary history. But species [6:10] concepts are what people use to try to [6:12] say, okay, I have this animal. Is it in [6:15] the same species as this other animal or [6:17] a different species from this animal? [6:19] And the species concept that you [6:21] probably learned Erns May is the [6:23] biological species concept which says if [6:25] they can breed and their offspring are [6:28] fertile then they're the same species [6:30] >> which seems like a good place to start. [6:32] >> It's a good place to start [6:34] >> because even in my understanding from my [6:36] fly biologists friends is that you can't [6:39] mate Drosophila with another species of [6:41] fly and get a fertile offspring. So even [6:43] among flies, there's some restriction. [6:46] And what's wild is that flies and [6:48] mammals of all sorts seem to know. Like [6:50] they actually don't try to mate in most [6:52] cases. They don't try to mate with other [6:55] species, which is fascinating in its own [6:57] right. [6:58] >> Beg to disagree there. I mean, if you [7:00] seen your dog tries, your dog probably [7:02] tries to mate anything it comes across. [7:04] >> Just hit seven [laughter] months. I've [7:05] not seen him hump a single time. He's [7:07] still intact. This time I'm keeping my [7:09] dog intact. We can talk about the [7:10] reasons for that. Health reasons. I [7:11] might get him a vasectomy. People we [7:13] never talk about this, right? You can [7:14] keep your dog intact and just give him a [7:15] vasectomy if you don't want them to [7:16] breed. [7:17] >> Right. Yeah. Right. A guest on this [7:19] podcast said that an animal expert from [7:21] the Karolinska. [7:22] >> That makes so much sense. [7:23] >> She said, you know, in Scandinavia it's [7:25] actually she claims and I believe her [7:28] that it's illegal to neuter a male dog [7:31] unless there's a health reason. In [7:32] Scandinavia and Australia the inverse is [7:34] true. Of course they're upside down, but [7:36] we'll forgive them for that. But yeah, [7:38] they need their hormones for proper [7:39] brain development, right? and we worry [7:41] about them running around and breeding. [7:42] There is this thing called the vasectomy [7:43] which is actually less invasive a [7:45] procedure than the the full neuter. [7:48] Anyway, we don't want to digress too [7:49] much but my dog doesn't try and mate I' [7:51] I didn't see my previous dog try and [7:53] mate with cats or [7:55] >> or even Chihuahua, you know. [7:57] >> Do you think Neanderls and humans are a [7:59] different species? [8:00] >> I don't know. But I want to know if we [8:03] are all the same species. This is an [8:06] edgy topic, right? But if humans I mean [8:08] if if it's somewhat based on [8:10] nomenclature [8:12] and if there's enough genetic variation [8:14] out there is it the case that people [8:18] that we call people are actually [8:21] divergent enough in terms of their DNA [8:22] that two people are not necessarily both [8:24] homo sapiens that there's some homo [8:26] sapiens with an asterisk. I'm not trying [8:28] to cast any hierarchy. They could just [8:30] be different. So you're referring to a [8:32] different species concept which is the [8:34] genetic spec species concept where an [8:37] organism is classified based on some [8:39] threshold of sequence similarity and [8:42] that is a species concept that is as [8:44] valid and valuable a species concept as [8:46] the biological species concept which [8:48] says you can't interbreed. If you're [8:51] interested in conserving species, you [8:53] might use a geographic species concept [8:55] that says, if you live here, you're a [8:58] Florida panther. But if you live in [8:59] Texas, you're a Texas panther. We're [9:01] going to call you different species. [9:02] Biology doesn't care about your species [9:05] concept. Your species concept is [9:07] something that you have adopted to have [9:09] a conversation with another person about [9:11] a particular topic. [9:12] >> Educate us on this Neanderthal piece. I [9:14] know this is a a topic very close to [9:16] home given that your husband works on [9:19] these issues and we can maybe we'll get [9:21] him on here separately but feel free to [9:23] steal his thunder in any way that that [9:24] you feel [9:25] >> uh my husband Ed Green was part of [9:27] spontabo's group when they were [9:29] assembling the Neanderl genome and so he [9:31] spent a lot of time thinking about [9:32] Neanderl I think what's interesting from [9:34] a species concept if we start there with [9:37] what's going on with Neanderls is we now [9:40] know based on studying DNA both from [9:44] Neanderls that used to be alive and a [9:46] different lineage of human called uh [9:49] Denisven we we call it this that was [9:51] first isolated again by Swonte Pabo's [9:53] research group from a tiny little finger [9:55] bone that they found in a cave Denise of [9:57] a cave in Russia that's why they're [9:58] called Denisvens we know that there were [10:00] multiple different species or lineages [10:02] or whatever you want to call them of [10:04] humanike people that were alive at the [10:07] same time and we know that after people [10:10] moved out of Africa to colonize Europe [10:12] they met our ancestors, homo sapiens, [10:16] anatomically modern humans, everything [10:18] you want to call them. They met groups [10:20] of Neanderls and they bred with them. So [10:23] if they were a different species, they [10:24] were violating the biological species [10:27] concept at this point. So again, species [10:29] concepts are just what we make of them. [10:30] And today most people have somewhere [10:34] between 2 and 5% of their DNA that is [10:38] from this ad mixture event, this [10:40] hybridization event between anatomically [10:43] modern humans dispersing out of Africa [10:45] and the Neandertols that were already in [10:47] Europe. [10:48] >> Many questions about this. First of all, [10:50] and try not to laugh, the silhouette [10:53] diagram that we've seen of apes [10:56] gradually in sort of time sequence [10:58] working their way to bipeedal and [11:00] upright. When we see that diagram, is [11:02] that substantiated by the fossil record? [11:04] >> It is. Yes. Um, we know that the the [11:07] lineage that eventually became us [11:09] evolved in Africa. We can trace ancestry [11:11] back to apes and then to primates or [11:14] primates and then to apes and then [11:16] eventually to us. The fossil record in [11:18] Africa is very fragmentaryary. One thing [11:20] that's really been really fun about [11:21] working in ancient DNA is the field of [11:23] paleo anthropology is pretty contentious [11:26] because there are so few bones that are [11:28] out there that if someone finds a bone [11:30] and it's a partial fragment of a jaw [11:32] with a piece of a tooth in it, they can [11:33] use that bone to completely revise what [11:36] we think has happened in human [11:38] evolutionary history. And maybe they're [11:39] right and maybe they're not. And they're [11:41] smart and they've been thinking about [11:42] these things and they compare it to all [11:44] the other bones. So there's a lot there. [11:45] What's brilliant about ancient DNA is [11:48] that if I can find a little pinky bone [11:50] in a cave in Denisa, right? And I can [11:53] get DNA from that. I know that my bone [11:57] has ancestors, right? If I have a bone [12:01] that might be somewhere on that lineage [12:03] to human evolution, I don't know that [12:05] that bone has descendants. I don't know [12:07] that that bone is part of our actual [12:09] family tree or if it's another one of [12:11] the dead ends that went in a different [12:13] direction and eventually became extinct. [12:15] But that is one of the coolest things [12:16] about being able to sequence one of [12:18] these bones because now you know what it [12:21] is and now you can line it up against [12:23] all the DNA from all of the people that [12:25] are alive today and discover things like [12:28] we all have ancestry because there was [12:30] breeding between these lineages because [12:32] they could and because I think that if [12:35] they can they do. [12:38] >> I would like to take a quick break and [12:39] acknowledge one of our sponsors JWV. 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It's interesting, [15:27] right? Because if you took the far ends [15:29] of the spectrum of the, you know, the [15:31] old world primate, you know, apes and [15:33] then the upright human walking, my [15:36] assumption is that let's just say you [15:37] used artificial insemination that you [15:39] wouldn't actually get viable [15:41] reproductively competent offspring from [15:42] those. But at some point, you know, two [15:44] different species, again, it's a [15:47] nomenclature or two, some at some some [15:49] point, but two non- genetically similar, [15:52] I don't want to say identical because [15:53] they're not twins, right? So, I don't [15:55] have a language here, forgive me, but [15:57] you can get breeding across species and [15:59] get reproductively viable offspring. [16:02] That that has to be the way this [16:04] happened, right? It couldn't have just [16:05] been through spontaneous mutations that [16:07] suddenly took animals from quadripeds to [16:10] bipeds. No, this is a very long and slow [16:13] evolutionary process. It's actually a [16:15] really good question and I think it's an [16:16] open question in evolutionary biology [16:18] and it's probably different. Evolution [16:21] does happen because of random mutations [16:24] that accumulate in a genome. And if you [16:26] think about what might happen if two [16:28] lineages are isolated from each other [16:30] for a really long time and in different [16:33] habitats, say this lineage is adapting [16:35] to the habitat that's it it's in. Maybe [16:37] it's, you know, very rainy and there's a [16:39] lot of water and there's a lot of floral [16:41] plants and over here it's drier and [16:44] there's really scrubby plants. There's [16:46] different selective environments and as [16:48] mutations arise in that genome, [16:50] different ones will go to fixation. The [16:53] size of the population also matters. If [16:55] a population is really small, even [16:57] mutations that arise that are bad can [17:00] become fixed in that population just [17:01] because the population is small and it [17:04] just happens by chance. And so over time [17:06] these two will become more and more [17:08] different from each other. So what [17:10] happens when they come back in in [17:12] contact with each other? I think it will [17:15] really depend on what those mutations [17:17] that arose over that time was. It could [17:19] be that there's a very short [17:22] evolutionary time but a mutation has [17:23] arisen that means the sperm can't [17:25] fertilize the egg or the egg can't [17:27] subdivide properly if you have a hybrid [17:30] ancestry. Or it could be that nothing [17:32] really has happened over a really long [17:34] evolutionary time and ad mixture can [17:37] happen. [17:37] >> Humans in the anderls diverged somewhere [17:40] 300 to 500,000 years ago. That's not [17:42] very long ago in evolutionary time. [17:45] Brown bears and polar bears diverged [17:46] about half a million years ago. And we [17:48] know that they can readily interbreed [17:50] and do whenever they overlap in habitat. [17:53] Yeah, they're called grer bears or [17:56] pizzly bears depending on which [17:58] direction. I know they're terrible [18:00] names, right? You want a different name [18:02] for this really [18:03] >> especially if you're a bear. [laughter] [18:04] >> Yeah. [18:05] >> But that's been happening throughout [18:06] their evolutionary history. We can see [18:08] this because using ancient DNA, we were [18:09] able to go back. We found um a polar [18:12] bear off the coast of Alaska that [18:13] probably lived more than 100,000 years [18:15] ago. And it had ancestry that we see in [18:18] brown bears everywhere in the world, [18:20] suggesting that that bear's ancestors at [18:23] some point or that bear's descendants [18:25] had hybridized with brown bears and that [18:27] DNA got passed around. We know that [18:29] during the last ice age, there were [18:30] polar bears that got trapped on the ABC [18:33] islands in southeast Alaska. And when [18:36] brown bears expanded from the mainland, [18:38] they interbred with those polar bears. [18:40] And brown bears all alive in North [18:42] America today have polar bear ancestry. [18:45] That is because of that interbreeding [18:47] 20,000 years ago or so. [18:49] >> Wow. [18:49] >> Yeah. So, in that case, a half a million [18:51] years had gone by. They're really [18:53] adapted to different habitats and yet [18:55] they can interbreed. But what's most [18:58] interesting and I think is relevant to [18:59] your question is that those hybrid bears [19:04] only ever live and survive as brown [19:06] bears. We see no evidence of brown bear [19:09] DNA getting into polar bears. And that [19:13] is again because of how evolution has [19:16] worked. And it's especially interesting [19:17] because it only really happens in the [19:19] direction where the mom is a polar bear [19:21] and the dad is a brown bear. Polar bears [19:24] are induced ovulators. So the presence [19:26] of a male will call them to ovulate, [19:28] cause them to ovulate. So you can [19:29] imagine situation where a brown bear [19:31] wakes up from hibernation, goes on to [19:33] polar bear habitat to scavenge for food, [19:35] comes across a polar bear female, [19:37] induces ovulation and they mate. The [19:39] other way around where a polar bear male [19:42] finds a seasonally ovulating brown bear [19:44] female probably wouldn't happen because [19:45] the timing of overlap wouldn't be right [19:47] and also he would probably kill her [19:49] rather than mate her because of the size [19:51] difference and difference in what [19:52] they're doing. So why is it then that [19:54] since bears live with their moms, all [19:57] the brown bears that we see that have [19:58] polar bear ancestry are brown bears, not [20:01] polar bears? We were working with some [20:02] polar bear biologists when we were doing [20:04] this analysis many years ago and their [20:06] hypothesis was simply that if you have [20:08] brown bear ancestry, you don't have [20:10] perfectly white fur and you cannot [20:12] successfully hunt seals. So it is just [20:16] adaptation that means that that ad [20:18] mixture doesn't work, right? So even [20:20] though there's no problem with the sperm [20:22] and egg mixing and the animal is born, [20:24] they cannot survive as polar bears and [20:26] so polar bear stays separate from brown [20:29] bear in that way. [20:30] >> I'm going to bring up dogs again, but in [20:32] the back of my mind is a conversation [20:34] about humans and this question about [20:36] different species of prior to homo [20:38] sapiens or homo sapiens and nearby [20:40] species having reproductively competent [20:42] offspring. So in the dog world, it's [20:46] well known that the English bulldog, [20:48] which has a big head, small hips, is the [20:51] byproduct of many crossings, but it's [20:53] basically the bullmastiff and the pug. [20:57] And this was an attempt to generate an [20:58] animal with a short snout so it could [21:00] clamp down for bull baiting, which [21:02] fortunately is an illegal sport now, and [21:04] to clamp down and not get shaken off by [21:07] the bull very easily. [21:08] >> Uh the floppy face is associated with [21:10] lack of pain receptor. There's a bunch [21:11] of things in the bullmastive lineage [21:12] that they want, but they wanted a low [21:14] center of gravity, so they took the pug. [21:16] But when you cross them, of course, the [21:17] females can't give birth because the [21:19] birth canal just doesn't allow for it, [21:21] >> right? [21:22] >> Humans realize this pretty quickly and [21:24] they learn cescareian section. So, I [21:25] could imagine a situation, although I [21:28] don't tend to think like this today. I'm [21:29] imagining a situation where homo sapiens [21:32] and some other non-hom homo sapien [21:35] humanish species were having sex [21:39] sometimes getting pregnant but the [21:41] babies would always die because the [21:43] birth canal and that structure of the [21:44] pelvis wasn't quite right to allow the [21:47] head size through which you know there a [21:48] lot of I hear a lot of arguments that [21:50] you know humans sort of optimized for [21:52] just enough space so that the large [21:54] humans you know we love to talk about [21:56] how big our brains are right could pass [21:58] through but no larger and and not much [22:00] smaller in most cases. [22:01] >> One of the reasons that giving birth is [22:02] one of the ways that women have died in [22:04] our evolutionary history. [22:06] >> Right. And and cesareian sections I [22:08] probably have changed human evolution in [22:10] that sense as has a aseptic you know [22:12] conditions and things like that. [22:13] >> Absolutely. For me my child was cesarian [22:15] birth. So [22:16] >> right. So, I like to think you would [22:17] have survived anyway, but the um but I [22:19] could imagine a mutation that was an [22:21] adaptive mutation where suddenly this [22:24] other species which maybe had a smaller [22:26] pelvis, a female could deliver this [22:28] child live. The the mother survived as [22:31] well and then that DNA, you know, [22:35] propagates so that there are now humans, [22:38] maybe it's been bred out, but that there [22:40] are or were humans walking around who [22:42] are not completely homo sapien or is it [22:44] not not possible? I don't know about [22:47] what's known about hip size or anything [22:48] like this, but but it is true that [22:51] humans and our archaic cousins Neanderls [22:53] interbred and that people walking around [22:55] today have Neanderl DNA. [22:57] >> 2 to 5% you said [22:58] >> two to 5%. What's interesting about that [23:01] and it touches a little bit on the [23:02] adaptation component that you you raised [23:05] is that I think most people or a lot of [23:07] people have heard this number. We have 2 [23:09] to 5% Neanderl DNA. less well understood [23:13] is that it's a different 2 to 5%. Like [23:16] the 2% Neanderl that is in my genome is [23:19] different from the 2% or maybe 5% [23:22] Neanderl that's in your genome is [23:23] different than the next person. [23:25] >> So it could be heart, liver, skeleton [23:27] and uh spleen for me and it could be [23:29] some other constellation for you. [23:31] >> Could be anything. And if we were to go [23:33] around the world today and pick out all [23:36] of the pieces of Neanderl DNA that exist [23:39] in humans today, we would put together [23:42] more than 90% possibly more than 95% of [23:46] the Neanderl genome just from people who [23:48] are alive today. And that tells us that [23:50] most of the Neanderl genome was not [23:54] maladaptive for people that pretty much [23:57] all of it could get passed on and live [23:59] in healthy humans today. [24:01] >> Interesting. We don't know what happened [24:03] in the other direction, right? We we see [24:05] Neanderl bones and there hasn't really [24:08] been any evidence of humans admins with [24:10] Neanderls. There has been evidence of [24:12] hybrids between Neanderls and Denisven. [24:15] This is really one of the most exciting [24:16] things that ancient DNA has been able to [24:18] contribute, I think, to understanding [24:20] human disease and human medicine and [24:21] what it means to be human. Because [24:23] before we had the Neanderl genome, if we [24:25] wanted to know what in our DNA makes us [24:28] human, we would have to compare all the [24:30] humans that are alive today with our [24:33] closest living relative, which is a [24:34] chimpanzeee or a bonobo. So there's 3 to [24:37] 5 million years of time between when we [24:40] shared a common ancestor. And a lot of [24:42] change happens in 3 to 5 million years [24:45] in your DNA. And some of it is useful [24:47] and some of it is what makes us human. [24:49] And most of it is just not. It's just [24:51] changed cuz copying errors during [24:54] copying cells and that's what happens. [24:56] That's how we're different. Every child [24:58] that's born has about a hundred [24:59] differences compared to their parents [25:01] because of copying error in the process [25:03] of making the sperm and making the eggs [25:04] that made that kids. So when we got the [25:07] Neanderl genome, that 3 million to 5 [25:10] million year long branch leading to us [25:13] was shortened to 300,000 to 500,000 [25:16] years by an order of magnitude. So now [25:18] if we want to know what it is that makes [25:20] us human, we have a much smaller list of [25:24] mutations or variants that we can look [25:26] at. And because we now know that 95% say [25:30] of the Neanderl genome exists in people [25:32] today, we've narrowed that list down [25:34] even further to that other 5%. What's [25:38] going on in that 5% of the genome where [25:40] no living person has Neanderl DNA? That [25:44] is where the stuff that the baby had to [25:46] have the human version in order for that [25:48] baby to survive. And that's where we [25:50] look to see what it is that made us [25:52] human. [25:53] >> A few years back when 23 and me and [25:55] these other uh companies started making [25:57] genomics in humans easier and more [26:00] affordable. A lot of guys boast about [26:03] Neanderthal DNA being vigor genes [26:06] whereas women try and downplay the [26:08] amount of Neanderthal DNA that they have [26:10] when they get their results. I found [26:11] that interesting. Is there any evidence [26:13] that the Neanderthal genes are quote [26:15] unquote vi vigor genes that they allow [26:17] for more durability of human male or [26:20] female? [26:21] >> It's an interesting question. If you [26:22] just look at that 2 to 5% of nano DNA [26:24] that we all have, most of it is not [26:26] anything that is under selection. So you [26:29] see it at about 3% frequency or so in [26:32] different populations. What is [26:34] interesting is when a piece of Neanderl [26:36] DNA is suddenly much more common in a [26:38] population of humans because that would [26:40] suggest I got some DNA from my Neanderl [26:43] ancestry and that bit of DNA suddenly [26:46] made me more fit because I had that bit [26:48] of Neanderl DNA. I was able to survive [26:50] and have more kids than everybody else [26:51] and so it increases in frequency [26:53] compared to average. And this has been a [26:55] really interesting thing to learn when [26:57] you think about Neanderl DNA. There are [26:59] a couple of things that have come out. [27:00] There are genes that are common in Latin [27:03] American populations that come from [27:05] Neanderls that predispose to type 2 [27:07] diabetes. There is another gene that I [27:10] think was again in a Latin American [27:12] population that makes people feel I [27:14] can't remember if it was more pain or [27:15] less pain, but it did have to do with [27:17] pain sensation. And I remember there was [27:19] a trial of people in Colombia where they [27:20] got to feel pain in some way and there's [27:22] a Neandertol gene associated with this. [27:25] But most of the really interesting ones [27:27] have been at inimmune related genes [27:30] during the pandemic. One of the first [27:32] alals that was discovered to be [27:34] associated with negative risk or bad [27:37] outcomes of COVID was a gene that came [27:40] from Neanderls. So it's a Neandertol [27:43] derived gene that was at something like [27:45] 50% frequency. So way above the 3% [27:48] average frequency in Asian populations. [27:51] And it it made people more susceptible [27:54] to the virus entering your lungs. And [27:56] presumably it only became that high [27:58] frequency because it was protective [28:00] against some other disease that was [28:01] circulating in the past. But the [28:04] trade-off of that is that it of course, [28:06] you know, made them more susceptible to [28:08] CO. There was another Neanderl [28:09] associated alil that was actually [28:11] protective against CO. So I think our [28:14] ancestors have been subjected to [28:16] different diseases and pandemics and [28:18] things that have happened throughout [28:20] life and we see the traces of that in in [28:22] ancient DNA. We can now go into [28:25] graveyards in Europe and and actually [28:28] isolate plague from dirt and from bones [28:31] from people who died of plague and look [28:32] and see how their immune systems and [28:35] genes have responded to exposure to to [28:37] things like this. It's really [28:38] fascinating. [28:39] >> Wow. My red head friends like to claim [28:42] that they have more Neanderthal and [28:45] therefore more vigor and pain [28:47] resistance. So I'm guessing the study [28:48] probably said more pain resistance. It [28:50] we have pain experts on here that verify [28:52] that indeed on average [28:55] >> that red heads tend to require more uh [28:57] anesthesia on average. So that tracks [29:00] but were neanderthalss were a lot of [29:02] them gingers. [29:03] >> Yes. This comes from studying at MC1R a [29:05] gene that's associated with the red [29:06] melanin. mammoths as well. They had I [29:09] mean you can see mammoth you can see [29:11] mammoth mummies with the actual hair and [29:13] you can see that they're kind of I don't [29:14] know if it's because they all bleached [29:15] to red, but there definitely is a um [29:18] some evidence from their genome that [29:20] they had reddish colored hair. Yes. [29:21] >> Interesting. Maybe we could just briefly [29:23] talk about eye color. Is it true that [29:25] all blue-eyed people descended from a [29:27] single blue-eyed human at one point? [29:29] This almost sounds like some eugenics [29:31] thing, but that's not why I'm asking. [29:33] Um, you also see a lot about how true [29:36] greeneyed people are are quite rare. Was [29:38] there a time when the population of [29:39] humans on Earth had a lot more greeneyed [29:41] people? [29:42] >> I think all of the colors, if you if you [29:44] look at um African populations mostly, [29:46] it's like me, dark eyes. I think that's [29:49] probably the ancestral state, but there [29:50] are lots of different eye colors that [29:52] have evolved and I think they're [29:53] selected for. I mean, people like things [29:55] that are different and unique and so [29:56] people want a mate that has blue eyes [29:58] and stuff. really think that that it was [29:59] selected for it. [30:01] >> Probably eye color was was sexual [30:02] selection. I I don't know what other [30:04] benefits blue eyes could have other than [30:06] looking very, you know, stoic and cool [30:09] as you're like trying to hunt down [30:11] something on them. [laughter] [30:14] >> Oh, geneticists are so much fun because [30:16] they're they're willing to just go [30:17] there. I was going to ask you this [30:18] question later, but I'll ask now because [30:20] it relates to what we're on to now. You [30:22] know, we tend to think of our lives in [30:24] in the time bin of our lives, you know, [30:26] roughly 100 years if we're lucky, right? [30:28] You know, at this stage of human [30:30] evolution for about 100 years, maybe 80, [30:33] maybe, you know, if we're fortunate, 90, [30:34] [clears throat] 100. But as somebody who [30:36] studies long periods of time and what's [30:39] happened to our species and other [30:40] species across long periods of time, [30:42] >> I'm always curious about this. I know [30:43] you have to make your coffee in the [30:45] morning and do every and you know manage [30:46] your life like anybody else in in the [30:48] today and in the week and in the month [30:50] and in the year but do you do you sit [30:52] back and think of all the different tens [30:55] and hundreds and thousands and millions [30:57] of years that I could focus on I'm going [30:58] to focus at this time bin right it's a [31:01] it's an interesting way to live now I'm [31:04] just curious how you pick the problems [31:07] that you choose to work on because we'll [31:08] talk about deextinction but you know why [31:11] the woolly mammoth why not like get the [31:14] Florida Panthers rebooted um completely. [31:17] Maybe why not both, right? But in terms [31:20] of just, you know, where to focus, like [31:22] why bring back things from way back when [31:24] >> as opposed to, you know, maybe we could [31:27] name a few species that uh disappeared [31:29] in the last 200 years. I'm guessing [31:31] there are [31:31] >> quite a few. [31:32] >> Yeah. [31:33] >> You know, how do you pick? And when [31:35] you're making that decision, what's [31:37] guiding it at the ethical level? What's [31:40] guiding it at the practical level? like [31:42] what what really are you trying to [31:43] accomplish? Cuz the stuff about humans [31:44] is fun place to play and put in the [31:47] backdrop. We'll return to it. But your [31:49] work's really focused on the extinction. [31:51] >> Mhm. [31:51] >> And like dinosaurs are one option. [31:54] Woolly mammoths are another. And you [31:56] know, just making sure that we don't [31:58] lose any species that we've got right [31:59] now. Also seems like a very very [32:01] important indeed noble pursuit. [32:04] >> Yes, there's that's a very complicated [32:06] set of questions there. Um, I think I'll [32:09] start with [32:12] what is motivating. And I think what's [32:15] motivating is what drives the selection [32:17] of the species. In fact, it's funny. I I [32:20] wrote a book a long time ago now called [32:22] How to Clone a Mammoth. And the first [32:23] chapter was how to pick a species. What [32:25] are you going to do? How are you going [32:26] to choose a species to bring back? And [32:28] there are technical, ethical, [32:31] ecological, and social reasons to pick [32:34] any of the species that you can. [32:36] Technical. These are the easiest, right? [32:39] We can't bring a dinosaur back to life [32:41] because we don't have dinosaur DNA. The [32:43] oldest DNA that we have ever recovered [32:46] from a bone is from a mammoth bone. A [32:48] mammoth's bone probably dates to around [32:50] 1 to2 million years ago. [32:52] >> It's hard to know how old it is in that [32:54] time range because there's not a really [32:55] clean way of dating something within [32:57] that time range, but it's old. Dinosaurs [32:59] went extinct more than 66 million years [33:01] ago. So, that's far outside of where [33:03] we're going to get recoverable DNA. And [33:05] that's because the skeletons just don't [33:07] >> they're fossilized. They've turned into [33:09] rock, right? So [33:10] >> there's there's no shred of DNA left. [33:12] >> Yeah. As soon as an organism dies, the [33:15] DNA in its cells starts getting chopped [33:17] up into smaller and smaller and smaller [33:19] fragments until eventually there's [33:21] nothing left. This is really by three [33:23] processes. UV light. We know about this. [33:25] It's why we wear sunscreen when we go [33:27] outside. But the UV light hits your DNA [33:29] and it actually breaks it. And when [33:31] we're alive, we have proofreading [33:33] enzymes that will come and fix your DNA [33:35] so you don't get cancer every time you [33:36] go outside. But that is an energy [33:39] requiring process. And after you die, [33:41] there's no more energy. So the breaks [33:43] from UV accumulate. Freezing and and [33:45] thawing is water molecules expand and [33:48] will physically break the DNA fragment. [33:51] So that's bad for DNA preservation. And [33:54] most importantly, just microbial decay. [33:56] The fungi, the bacteria that get into an [33:59] organism when it's decaying. and chew it [34:01] up to transform that carbon and nitrogen [34:04] into the next generation of organisms, [34:06] right? And so that process is slower in [34:09] some environments than others. Exactly [34:11] in the same way that your sandwich will [34:14] rot faster if you leave it in the sun [34:16] versus in the shelf versus in the fridge [34:19] versus in the freezer. DNA will preserve [34:21] for longer in the cold Arctic where [34:24] things are rapidly buried in frozen dirt [34:26] and they stay that way for a million [34:28] years. like this mammoth bone that we [34:30] were able to recover DNA from. But if [34:32] you die in a very hot, wet, swampy place [34:34] like Maitius, where the dodo lived, it's [34:37] another one of the species that we're [34:38] working on at Colossal. Very little [34:40] chance you're going to be able to [34:41] recover DNA from any of the fragments [34:44] that are on Maitius Island. And I have [34:46] tried like hundreds of bones from [34:47] Maitius. We have a great dodo genome, [34:49] but it's from a bird that went to Europe [34:51] alive on a ship and is part of the [34:54] collection at the Danish Museum of [34:55] Natural History. So you have to have a [34:58] wellpreserved sample that you can get [35:00] DNA from. Ideally many of them because [35:03] you want to know what are the DNA [35:05] changes that made a mammoth a mammoth [35:07] instead of another type of elephant. [35:08] Right? So many of them will help you to [35:10] do that. But one is good enough to get [35:12] some sort of template for what you're [35:13] going to do. You probably should know [35:16] what caused that species to go extinct [35:19] in the first place so that you don't [35:21] bring something back that becomes the [35:23] first species to be deextinct. and then [35:26] the first species to be re-extinct [35:29] >> or bring back something really nasty [35:31] that knocks out a bunch of other [35:33] species. [35:33] >> Yeah, you have to understand the role [35:35] that that animal played in the ecosystem [35:37] and whether that niche is still [35:39] available. I mean, ecosystems [35:42] don't live in a vacuum just waiting for [35:44] something to come back. And in some [35:47] cases, there's a real ecological driver [35:49] for the species that we're focusing on. [35:50] We feel like there is a real ecological [35:53] role for these species to play. That [35:55] these ecosystems are destabilized [35:57] because of extinction. And by bringing [36:00] back these key ecological interactions, [36:02] we can make those ecosystems more robust [36:05] and more resilient in the face of all [36:07] the crap that people are always throwing [36:08] at our natural ecosystems. [36:10] >> Could you give me an example of of that? [36:12] So, if you were to bring back woolly [36:14] mammoths, I'm guessing that's not going [36:16] to save the Amazon forest. But what what [36:18] probably is going to do something useful [36:20] based on what you just said. [36:21] >> Yeah. So, if you think about what large [36:24] animals, large herbivores do in their [36:26] ecosystem. They turn the soil by walking [36:29] around. They knock down things. [36:32] Elephants knock down trees. Mammoths [36:33] probably lived places above trees, so [36:35] that wasn't what they were doing, but [36:37] they were distributing seeds and [36:38] nutrients. Have you heard of Pletoine [36:40] Park? This is up in northeastern [36:42] Siberia. There are these two scientists. [36:44] It's actually Sergey Zimov who's a [36:45] Russian Academy scientist and his son [36:46] Nikita. They've been running this park [36:48] up in northeastern Siberia for a long [36:50] time. And they have been really [36:54] interested in understanding what happens [36:56] when you restore all of the species that [36:59] used to live on the tundra to the tundra [37:01] ecosystem. And they have bison that [37:04] they've brought in from Canada and wild [37:06] horses and several species of deer and [37:08] muskox. and they've seen that having the [37:11] animals on the landscape that they've [37:14] fenced off actually causes the plants to [37:17] come back with more verocity. So these [37:20] animals, they have to eat during the [37:23] winter. So in order to find food, they [37:26] scrape the snow off of the surface of [37:29] the dirt. In the absence of these [37:31] animals, the snow stays on the surface [37:33] and snow is a very efficient insulator. [37:36] So, it traps the summer heat in that [37:38] frozen sediment, causes the sediment to [37:41] melt faster, and when the plants come [37:44] back, it's a particular type of plant [37:45] that can live in that moist sediment. [37:48] With the animals, you get a a mosaic [37:51] landscape where there's some parts that [37:53] are moist and and wet. there are other [37:56] parts that have been exposed and they're [37:57] dry and colder and you get broader [37:59] diversity of plants that are coming back [38:02] where these animals are. So, they are [38:03] essentially recreating their ecosystem [38:06] just by being there. [38:08] >> I'd like to take a quick break and [38:09] acknowledge our sponsor, AG1. I'm [38:12] excited to share that AG1 has just [38:14] launched their newest formulation, AG1 [38:16] Pro. AG1 Pro takes the clinically backed [38:19] AG1 formula, which is a blend of [38:21] vitamins, minerals, probiotics, and [38:22] adaptogens, and adds three important new [38:25] ingredients: creatine monohydrate, [38:27] calcium HMBB, and zinc carnosine. Each [38:30] serving has 5 grams of creatine [38:31] monohydrate to support muscle strength [38:33] and performance, as well as brain [38:35] health. 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So, you're picking, [39:23] look, you don't have to pick a species, [39:25] but you got to pick something if you [39:27] know two or three, right? I can't say [39:29] like we're going to bring back [39:30] everything from a given era. So, [39:33] >> so we did technical, ethical, [39:35] ecological. I think another answer is [39:38] what is going to make an impact right [39:40] when I joined Colossal, we didn't have a [39:43] bird program, but I really wanted there [39:46] to be a bird deextinction program [39:48] because all of the tools that we are [39:50] developing for deextinction are the same [39:53] tools that we can use to use synthetic [39:56] biology to modify the genomes of living [39:59] species and help them avoid becoming [40:01] extinct. And so the kit that we're [40:04] building from multiplex genome [40:06] engineering to cellular rejuvenation to [40:09] iPS cell technologies for wild animals [40:12] to even learning the link between [40:14] particular letters of the DNA sequence [40:17] and what those letters actually do to [40:19] cause an animal to look the way that it [40:21] does. Right? All of that is applicable [40:24] across the board. So the stack that [40:25] we're building for de-extinction for [40:27] synthetic biology stack applies to [40:29] synthetic biology for conservation. So [40:32] when I joined Colossal and there wasn't [40:33] a bird program, they had launched the [40:35] mammoth program which is a placental [40:37] mammal and the thyloine program or [40:39] Tasmanian tiger that's a marsupial [40:41] mammal. But birds are among the most [40:44] endangered species on the planet and it [40:46] is not possible to clone birds using [40:50] sematic cell nuclear transfer the [40:52] process that most famously brought us [40:53] Dolly the sheep because we don't have [40:55] access to the egg cells at the right [40:57] stage. So while that process is really [40:59] pivotal and integral to our mammoth and [41:02] thyloine and the other mamalian project, [41:04] it's just not possible to use it for [41:06] birds. And so I wanted a program that [41:09] was going to help us develop [41:11] technologies for birds. So why did we [41:13] pick the dodo compared to any other bird [41:16] for the first one? [41:17] >> Cool beak. It comes down to that which I [41:20] also think is a really important part of [41:23] talking about this project and it's the [41:25] idea of awe of being excited about [41:30] something. We get kids drawing animals [41:33] that drawing mammoths and bioines and [41:35] dodos and sending them to us all the [41:36] time. Ben has put them in frames up [41:38] around some of them are good. The dodo [41:40] with its sort of rounded top beak also [41:44] and the way the eyes are typically [41:46] drawn. It also has a kind of cartoonish [41:48] friendly toucan Sam type of look. [41:51] >> Well, it was in Alice in Wonderland. [41:52] Most of what we know about the dodo is [41:54] from cartoonish drawings of this animal. [41:56] There are some and of course there's [41:57] skeletons that we can piece together [41:59] using the many many bones in Maitius [42:01] that do not have any DNA in them based [42:03] on my very best tries. [42:05] >> You didn't choose to bring back like a [42:06] 75 foot long python. Thank goodness. Oh, [42:09] but there may be virtue in doing that. [42:11] >> There might [clears throat] be. Although [42:12] I think there are plenty of pythons in [42:13] Florida Everglades right now. [42:15] >> I'm not a snake fan. No disrespect to [42:17] the snake lovers. But talk about uh bird [42:21] developmental genetics for a second. Not [42:22] to scare anyone away, but hang in there. [42:24] A few years ago, I saw something that um [42:27] two female condors can reproduce. [42:30] >> Crazy, right? [42:31] >> And this, of course, for [42:32] >> it actually wasn't two female condors [42:34] reproducing. It was one female condale [42:37] just having an egg all on her own. [42:39] >> Yeah. And because of the socopolitical [42:42] implications, this got people in well, [42:44] we're from Northern California pretty [42:45] excited. They were like, "Okay, we don't [42:47] need men after all." Right. That was the [42:48] That's always That was the You know, [42:50] >> that's funny cuz what I heard was life [42:52] finds a way. So, how did one female [42:55] condor, who we trust her when she says [42:58] that she never mated with a male condor [43:01] or a female condor, we believe her, was [43:04] able to reproduce. [43:05] >> My scientific explanation is that [43:07] meiosis didn't fully separate and she [43:10] ended up having a fertilized egg or [43:12] >> we should explain meiosis. So the [43:13] separating of the of the [43:15] >> of the cells during during the very [43:17] early phase when you're making eggs or [43:19] making sperm, you're trying to duplicate [43:21] your cell, but instead of that, you make [43:22] two versions of the cell that only have [43:24] one copy each of your [clears throat] [43:26] chromosomes. So when normally in normal [43:28] reproduction, an egg that has one copy [43:31] of the set of chromosomes and a sperm [43:33] that has one copy of the set of [43:34] chromosomes come together, they're [43:36] fertilized. The resulting eventually [43:38] embryo has two copies, one from mom and [43:40] one from dad. In this case, there was no [43:43] sperm. There was an egg that had both [43:45] copies, probably because of a mistake [43:47] during meiosis. Like, they didn't [43:48] separate out properly and that was able [43:50] to develop full term. [43:52] >> Was the offspring viable? [43:54] >> Yes. [43:55] >> What's weird about that? Yes. I mean, [43:58] it's very very cool and and um very [44:00] clear the way you described it how that [44:02] could happen because you need the two [44:04] sets of chromosomes. So, both sets came [44:06] from mom in this case and only mom. But [44:08] in humans where that happens uh and it [44:10] does happen on certain chromosomes these [44:12] homozygosity effects they happen under [44:14] certain conditions like there are these [44:16] paternal or maternal imprinted [44:18] conditions like praater willy syndrome [44:20] where paternal DNA gets kicked off and [44:22] you have two copies from mom which [44:24] doesn't sound like a bad thing unless [44:27] there are things on the paternal [44:28] chromosome that are required for [44:29] development and the reverse also happens [44:31] like in Angelman syndrome I think it is [44:34] that all the genes that everyone healthy [44:37] walking around out you and me and have [44:39] genes that only came from our mom [44:42] >> and only from dad. And so if you get two [44:44] copies from mom of a chromosome or two [44:47] copies from dad, you end up with like [44:49] pretty severe deficits in brain [44:51] development and other things [44:52] >> and some things. And you also could [44:54] never be a boy because the one gene that [44:56] turns on that cascade of male [44:58] development is called SRY. It's on the Y [45:00] chromosome. So without that gene, you [45:03] would never be a boy. You would always [45:04] be a girl. Tricomemes where you get two [45:06] copies from mom and one copy from dad. [45:08] Those can also be bad because of [45:10] different levels of gene expression [45:11] >> is down syndrome. [45:12] >> Down syndrome is tricome 21 and there [45:14] are a few other tricomemes that are [45:17] >> compatible with life. Try 21 is the most [45:20] common one because those people can live [45:22] obviously with some challenges [45:24] additional challenges because the [45:25] additional chromosome but they can live [45:26] full lives till relatively middle age. [45:29] Right? Is there a way of looking back at [45:32] the ancient DNA of different species and [45:34] knowing if they reproduce the way we [45:36] imagine they reproduce? I'm not talking [45:38] about the actual verb sex. I'm talking [45:40] about the repro like somehow sperm and [45:42] egg met but or there was something more [45:45] like the condor you were just describing [45:46] where the females were able to reproduce [45:49] through these kind of unusual [45:51] [clears throat] myiotic events. [45:52] >> Um I think because well obviously sex [45:54] has evolved a bunch of different times [45:56] on the on the animal or the tree of [45:58] life, right? And so different ways of [46:01] doing sex have evolved. So we have this [46:04] XY process where the males are what we [46:07] call the heterogimedic sex. So the males [46:09] have an X and a Y and the females have [46:10] two X's and they don't have a Y. But do [46:13] it differently. They have the WZ and [46:16] it's the the females that have the two [46:18] different chromosomes. The males that [46:19] don't. And then there are, you know, [46:20] alligators and crocodiles and they do [46:22] sex determination based on the [46:24] temperature at which the egg is sitting [46:27] during a very critical period during [46:29] development. And so, [46:30] >> yeah, there's like there are communities [46:32] online [46:33] >> I've learned that actually believe this [46:34] kind of stuff for humans. There all [46:36] these theories about how to get a male [46:37] or female offspring based on position of [46:39] intercourse, temperature, location, [46:42] food. None of it beats chance, [46:45] >> right? Um [46:45] >> or if you really want ixxie right which [46:48] is the process by which you take an egg [46:49] and you take a particular sperm [46:51] >> that you know whether it's carrying the [46:53] Y chromosome or not and use that to [46:54] fertilize the [46:55] >> can you actually determine the XX or XY [46:58] of the sperm and they can do that now [47:01] you can do it [47:01] >> you can select so you can do true sexual [47:04] selection [47:04] >> you can and it's because the Y [47:06] chromosome is teeny teeny tiny compared [47:08] to the X and so you can centrifuge them [47:10] and because they're smaller they sort [47:12] out. [47:13] >> Got it. So you can spin sperm around. [47:15] Don't do this at home. And then based on [47:17] how the different things of different [47:19] weights basically spin out to different [47:20] depths. And so you can bias the [47:23] likelihood that you'll get a XY carrying [47:25] sperm or an XX [47:26] >> caring. [47:27] >> Or you can use cloning like we are at [47:29] Colossal and like we're thinking about [47:30] in synthetic biology where you actually [47:32] know the sex because you're starting [47:34] with an actual sematic cell, a tissue [47:36] cell of that animal instead of using a [47:38] sperm and an egg. [47:39] >> So let's talk about that. And before we [47:41] do that, we should probably do a brief [47:43] developmental neurobiology lesson. You [47:45] beautifully told us what meiosis is. You [47:48] know, sperm or egg, you have 20. Well, [47:50] in humans, it's 23 chromosomes. So, you [47:52] only have half so that they can meet in [47:54] conception and then start to divide and [47:57] create more cells that become the [47:58] embryo, right? And so, in these other [48:01] species, I guess you know how many [48:02] chromosomes there are. And I must use [48:04] the woolly mammoth or the cuz it's a fun [48:06] one. Birds [clears throat] are [48:07] complicated. As a developmental [48:08] neurobiologist in my past, the bird [48:10] stuff gets tricky. Reptiles [48:12] >> birds are tricky and there's really [48:13] tricky. [48:14] >> Some birds are trickier than others. I [48:16] did not know until I joined Colossal [48:18] that there are some birds that have a [48:20] what's called a germline restricted [48:21] chromosome which doesn't exist in any of [48:24] their cells except for the germline. [48:26] >> Germ line or the sperm and eggs. [48:27] >> Sperm and eggs. And it comes into being [48:29] this chromosome just in the germ line [48:31] and then it disappears. [48:33] >> Wow. [48:33] >> I know. Biology is amazing. The birds [48:36] have these like mini mic chromosomes [48:37] that are a pain to assemble. And if [48:39] you're sequencing DNA from an extinct [48:42] species where the DNA fragments are [48:43] really short and you have to do it by [48:45] taking each one of those really short [48:46] fragments and trying to figure out where [48:48] on a whole genome it goes best on a [48:51] computer. We don't actually do it with [48:52] our with like a tweezers or anything [48:54] like that. But [48:55] >> yeah, the birds are really cool animals, [48:57] but they from reproductive biology [48:59] standpoint, it's it's tricky. So with [49:01] the woolly mammoth was a mammal. [49:03] >> Yes. [49:04] >> Right. Okay. And you know that because I [49:06] mean people can say well duh because [49:08] people normally think oh it has fur must [49:10] be a mammal but that is not necessarily [49:11] true right you have monotremes and all [49:13] this other stuff. So you know it's a [49:15] mammal because there's evidence of [49:16] lactation. How are you deeming it a [49:19] mammal [49:19] >> using its genome. So we've been able to [49:21] sequence whole genome sequences high [49:23] quality whole genome sequence sequences [49:25] from multiple mammoths that date to the [49:28] last million and a half years. And we [49:30] can assemble those genome sequences [49:33] using a computer and then we compare [49:35] them to other animals that are alive [49:37] today. And we know that the closest [49:38] living relative of a mammoth is an Asian [49:41] elephant. And in fact, mammoths and [49:43] Asian elephants are more closely related [49:45] to each other than Asian elephants are [49:47] to African elephants. So mammoths are [49:50] nested within the elephant family, most [49:53] closely related to Asian elephants. [49:55] >> Okay. Okay, so if you get this the [49:57] sequence of DNA from a mammoth, so you [49:59] know, okay, this is the complete genome. [50:00] And I think a lot of people probably [50:01] don't realize that your complete genome [50:03] is represented in most all of your [50:05] cells. There are rare exceptions. It's [50:07] just that not all those genes are [50:08] expressed, which is why you get a hair [50:09] cell versus skin cell versus heart cell [50:11] and so on. [50:11] >> That's the epigenome, [50:12] >> right? But the menu is there. [50:14] >> The menu is there. [50:15] >> Are you growing up DNA in a laboratory [50:17] that is that that is the mammoth [50:19] sequence? [50:19] >> So this is what comes, I think, from [50:21] Jurassic Park. And this is why I love [50:24] talking about Jurassic Park because I [50:26] think everybody has an idea of how we're [50:28] doing this because they saw Jurassic [50:29] Park or they've thought about this [50:30] movie. And what happened in Jurassic [50:32] Park, and I should just say it was not a [50:36] documentary, so let's not get carried [50:38] away here, right? Okay. [laughter] [50:39] What happened in Jurassic Park was [50:41] scientists found mosquitoes preserved in [50:44] amber. They stuck a needle into those [50:47] mosquitoes, preserved an animal. They [50:49] sucked out a bit of stuff that happened [50:52] to be blood and it had dinosaur DNA and [50:54] then they had the little dancing DNA [50:57] thing tells you about how they piece it [50:59] together and you can see the little [51:01] pieces of dinosaur DNA lining up next to [51:03] each other and then there's holes and [51:05] they fill in those holes with frog DNA [51:07] which was a weird choice even at the [51:10] time because we already knew that birds [51:11] are dinosaurs right so why they pick [51:13] frogs I don't know but anyway they [51:15] >> talk to Richard Harland at Berkeley or [51:17] something that's another biology joke. [51:19] Look it up. [51:20] >> But that's not actually how we're doing [51:22] this. What we're doing is somehow easier [51:25] than that. Because we know that Asian [51:27] elephants are the closest living [51:29] relative of mammoths. We also can by [51:32] sequencing a bunch of Asian elephant DNA [51:34] and sequencing a bunch of mammoth DNA. [51:36] We can see that they already have almost [51:39] exactly the same genome sequenced. [51:41] >> How similar? [51:42] >> They're about 99% similar. It depends on [51:44] how you calculate the percentage and [51:46] things like that. As a point of [51:47] reference, how similar are we to the [51:50] chimpanzees in terms of percentage [51:52] similarity of DNA [51:53] >> in that counting? It's about the same. [51:55] >> But some people might say, "We don't [51:57] look anything like chimpanzees." [51:59] >> Well, [51:59] >> 99 just sounds like so similar, like [52:01] you're going to get the same thing. [52:02] >> Yeah. Well, there I mean, people [52:04] calculate this in lots of different [52:05] ways. There's some statistic online that [52:06] we're 85% the same as a banana or [52:09] something like that. Like a lot of our [52:10] DNA is I don't know if that's true. [52:12] Right. Yeah. Is the goal to recreate the [52:14] ancient mammoth or is it to create a a [52:17] pseudo hybrid of the ancient mammoth? [52:19] >> The goal is to think about a mammoth in [52:22] terms of what it does and what it looks [52:24] like. And this gets back to this idea [52:26] that you brought up in the beginning [52:28] about a species concept. You know, this [52:29] is one of the most common things that we [52:31] hear. If you are going by a strictly [52:34] genetic species concept where you're [52:37] saying that a species an organism is [52:39] classified just by some threshold of [52:41] similarity sequence similarity to [52:42] something else. That's the only way you [52:44] can call it that thing. That isn't what [52:46] we're doing in deextinction. That's not [52:48] what anyone doing synthetic biology is [52:50] thinking about when they're designing or [52:52] engineering things to solve problems. [52:54] Engineering animals or engineering [52:55] plants to solve problems that we have in [52:57] the future. The genetic species concept [52:59] is a an idea that was proposed to [53:02] classify organisms that evolve over a [53:06] very long evolutionary bifurcating [53:09] filogenetic tree process where [53:11] accumulation of changes is over many [53:13] generations over a long time. Our [53:15] mammoths, our direwolves are not created [53:18] by that process. And so that concept [53:21] really doesn't apply. I think that's [53:22] where a lot of the the disinformation [53:24] comes. I'm going to just push back a [53:26] little bit on this because what I don't [53:27] want is for this sort of [53:30] >> definitional gatekeeping to really take [53:32] over and become the whole story. It it's [53:34] important. It's it's a question, but [53:36] it's a narrow one. And I think it crowds [53:38] out the the real discussion about what [53:41] it is that we're doing, how the [53:42] technologies that we're developing can [53:44] be applied to [53:46] >> ecosystem health to help stop species [53:48] from becoming extinct, even as synthetic [53:51] biology for for human medicine. So we're [53:54] not trying to make something that is [53:56] identical to a particular individual [53:58] that used to be alive. Our mammoths are [54:00] millions of letters of DNA code [54:02] different from each other. So even which [54:04] one to use would be an open question. [54:07] Instead, what we're doing is focusing on [54:10] where all of those mammoths are the same [54:12] as each other [54:13] >> but different from elephants. And [54:15] thinking that those places, like we were [54:17] talking about with humans, those are the [54:19] places that are important to make a [54:20] mammoth a mammoth. And that is where I'm [54:22] going to focus my energy in bringing [54:25] back a mammoth, which will be an [54:28] elephant that is capable of living in [54:30] the habitats that a mammoth lived in. [54:33] Mammoths will have to live in habitats [54:35] that exist today and tomorrow. So, the [54:37] mammoths will have to be genetically [54:38] capable of living with the pathogens and [54:41] the microbes and the food sources and [54:43] the microbiome that the elephants that [54:46] will birth them can survive in today. [54:49] When you mentioned um species [54:51] nomenclature gatekeeping, I have a [54:53] feeling this is based on the publicity [54:56] around the dire wolf. [54:57] >> Yes. [54:58] >> Okay. I just I like to just address [54:59] things very directly. I want to be very [55:01] clear. I'm not arguing for species [55:03] gatekeeping here. Uh that's not what I [55:05] do. I have I own a mut after all. [55:07] >> It's not even that. It's it's that um [55:10] somehow this idea of what we should call [55:13] it based on this very specific [55:15] definition of you can only call it this [55:17] if it's some threshold genetic [55:18] similarity is noise. It's not an [55:21] important part of the conversation. I [55:22] mean, it's a part of the conversation [55:24] and it's one that we have, but if people [55:25] don't want to call it a direwolf, just [55:26] don't, right? Like, [55:28] >> well, I think like like all things media [55:31] and Hollywood, you know, I think [55:32] Jurassic Park did an amazing service to [55:36] science and the excitement around these [55:37] concepts, but probably did a disservice [55:39] as well by embedding in people's minds [55:41] that the idea is to bring back the the [55:43] exact same animal. [55:44] >> But didn't we just say that these [55:47] dinosaurs were some dinosaur DNA and a [55:49] whole bunch of frog DNA? Nobody looks at [55:51] them and goes, "No, they're not a [55:52] dinosaur." [55:52] >> You're a scientist and I am, too. [55:54] Actually, it's funny that you you [55:55] mentioned this because my dad's a [55:57] theoretical physicist. He was involved [55:58] in chaos theory. He's been a guest on [56:00] the podcast. I remember when Jurassic [56:02] Park came out, he didn't dislike it, but [56:04] the part where he kind of rolled his [56:05] eyes was there's a description of chaos [56:07] theory in there and what it means. And [56:10] in Hollywood, they love to you use the [56:12] example of like a butterfly flaps its [56:13] wings in Patagonia and then this thing [56:15] happens in the to the barista in in [56:18] Brooklyn, you know, and people like to [56:20] bridge those concepts and they think, [56:21] "Oh, that's so cool." Like, so it's it's [56:23] it's sticky, as we say. But that's but [56:25] he he was rolling his eyes. He's like, [56:27] "Okay, that's not how these things [56:29] work." And so for people that are [56:30] experts in the area, it can be a little [56:32] bit grading at times. But the public, I [56:35] think, is open, right? in my experience [56:36] in doing what I do is that the public if [56:38] they just have the knowledge in hand and [56:40] the way you described it great. So, [56:42] >> so our direwolves, they have 20 edits [56:45] that we picked um and we we sequenced [56:48] genomes from fossil direwolves. We [56:50] learned from those genomes what genetic [56:53] changes made those animals bigger, more [56:55] robust, light colored in coat and then [56:58] we engineered those changes into a [57:00] greywolf genome to recreate the [57:02] direwolf. If it looks like a direwolf [57:04] and it's able to fill the niche of a [57:06] direwolf, I'm happy to call it a [57:08] direwolf. [57:08] >> So, the direwolf was a very interesting [57:10] choice. Clearly, you were successful in [57:12] creating this animal. [57:14] >> Sounds like you were very intentional in [57:16] picking which genes. It wasn't like, oh, [57:17] we're going to take a couple genes from [57:18] the direwolf and throw them into this [57:20] this other wolf and create what we call [57:22] as the direwolf. [57:23] >> If I were to look at the direwolf [57:27] and a you said a greywolf. [57:29] >> Yes. Side by side, is the direwolf [57:32] larger? [57:32] >> They are [57:33] >> on average at the same age. Are there [57:35] any other features that are are visibly [57:36] different or the other features more [57:38] adaptive in terms of gut and ability to [57:40] live in certain environments and this [57:42] kind of thing? [57:42] >> They're muscular. The fur is uh longer [57:46] and more full and it's also light [57:48] colored. I I think it's an important [57:50] thing to understand about how we're [57:51] selecting these because we are very [57:54] deliberate about what we're doing and [57:56] it's both because we want to with some [57:58] fidelity bring back these extinct traits [58:00] so that the animals can eventually be [58:02] released. Now, we're not planning on [58:03] rewing direwolves and we will study the [58:05] animals and learn about the effect of [58:07] their genes on their lifespan. [58:09] >> Yeah, sorry. [laughter] [58:11] But the other other animals, the [58:13] ultimate goal is to to eventually have [58:15] populations of freeling [58:19] as as they would like to. And so we we [58:21] want to understand how healthy they are, [58:23] how they're going to interact with the [58:24] habitat that's there. And we want to [58:26] make sure that because we with synthetic [58:28] biology have the power to engineer them [58:30] in a very deliberate way that we can do [58:32] that in a way that's safe. So the hair [58:34] color is a a really interesting example [58:36] of this and the strategy that we use. So [58:39] when we sequenced the genomes of the [58:41] fossil direwolves, we found that they [58:43] both had variance, the same variance in [58:46] two genes that would have made them have [58:48] light colored coats, but in living [58:52] greywolves and dogs, variance in those [58:55] genes, not the same ones that we saw in [58:57] direwolves, but close enough to where we [58:59] would need to do the edits that you have [59:00] some concern that you would have [59:02] bystander edits that might cause a [59:04] problem, can lead to oculaneous [59:06] albinism. Um, so blindness or deafness [59:09] in these dogs. [59:10] >> And we decided that because we're not [59:13] changing the whole genome, they have to [59:15] be safe on a greywolf genetic [59:17] background, we wouldn't make the trait [59:19] that way. It just wasn't passing the bar [59:22] of animal welfare safety. And so [59:24] instead, we brought back the direwolf [59:26] light colored coat using different edits [59:29] that we know are safe in a greywolf [59:31] background because there are light [59:32] colored domestic dogs and greywolves. [59:34] So, we used the edits that we know are [59:36] safe because they exist in living dogs. [59:38] >> Oh, that's cool. [59:39] >> So, we were able to engineer using all [59:41] the tools of synthetic biology, this [59:43] light colored coat that is the direwolf [59:45] light colored coat, but using a path [59:47] that we know is safe. And this is the [59:49] way that we think about all of our [59:50] projects. We have to take an Asian [59:53] elephant and turn it into a woolly [59:55] animal. That trait requires changing not [59:58] just the structure of the hair, but of [60:00] the skin itself. We have to make room [60:02] for more follicles, sebaceous glands, [60:05] different approaches to be able to [60:06] support that woolly coat, right? And we [60:09] need to be able to do that in a way that [60:11] results in a healthy animal because [60:13] these are very longived animals. Takes [60:15] 22 months for gestation. They reach [60:17] sexual maturity at 14 and it's a lot of [60:19] work. [60:20] >> So, how many dire wolf wolves are [60:23] walking around right now in some [60:24] location? Right now there is Romulus and [60:27] Reheis and they are almost two years [60:30] old. And [60:30] >> male and female or male? [60:31] >> Romulus and Remis are boys and Klesia is [60:33] a girl. She is about 18 months old or [60:36] so. [60:37] >> Is the intention to mate them? [60:38] >> No, they're too closely related. We're [60:40] stopping them using hormones. So rather [60:42] than [60:43] >> But they live together. [60:44] >> They live together. She was reared by [60:46] herself. The boys had each other and she [60:48] had just her. So she's a little bit on [60:49] the like I mean you would never look at [60:52] these animals and say this is the way a [60:54] wild wolf behaved. They were hand [60:55] reared, right? Um, but she's a little [60:57] bit on the specially goofy side, but [60:59] she's the she's the best. She's [61:01] adorable. [61:01] >> Do you feel safe interacting with them? [61:03] >> Oh, no. We have interacted with them, [61:05] but the people who work with them a lot [61:06] that they know, feel safe interacting [61:08] with them, but as they got older, it was [61:09] very clear that they're wild animals. [61:11] These are not domestic dogs. Remis is a [61:13] little bit less skittish than Romulus. [61:15] He will eventually, if you sit in the [61:17] middle of where they are, he will [61:18] eventually kind of sniff around and and [61:21] maybe come near you. Romulus wants [61:23] nothing to do with you, which is funny [61:24] because they're they're identical twins, [61:26] but they're slightly different [61:27] interacting with people, but it's very [61:28] clear that they these are wild. They're [61:30] also huge, right? So, [61:31] >> yeah. How big are they? [61:32] >> I don't have the latest measurements on [61:34] how big they are. And of course, it's [61:35] seasonal for all these different things, [61:36] but I know that they were at some point [61:38] they were at least like 120 lbs, which [61:40] is big for a grey wolf. [61:41] >> Yeah. So, everything you just said about [61:44] these direwolves, would you also say [61:46] about grey wolves? Like, you wouldn't [61:47] want to be alone with one. Some can be [61:49] skittish, some can be calm. like you [61:51] >> you know I have good friends who are [61:54] somebody you should think about having [61:55] on actually that if you're interested in [61:56] dog behavior and what we've learned [61:58] about domestic dogs and I know you have [61:59] a dog and it's very exciting. Ellen [62:00] Carlson is at the Broad Institute and at [62:03] UMass and she's done a lot of work with [62:05] wolf dog hybrids and then also with [62:08] domestic dogs and trying to map genes to [62:10] behavior and all these things and [62:11] basically showed that breed stereotypes [62:13] are just not real. The that you really [62:16] can't map genes to behavior except for [62:17] Chihuahua. They're just terrible. I'm [62:19] just kidding. No, it's okay. We had [62:20] Caesar Milan on the podcast. [laughter] [62:22] He'll be the first to say that in in [62:24] almost every decade in the United [62:26] States, there was the demonized dog [62:28] breed. It was actually German Shepherds [62:30] post World War II. [62:32] >> Then it was [clears throat] Doberman's. [62:33] >> Same reason. Then it was the bulldog, [62:35] the English bulldog, which having had [62:37] English bulldog is hilarious to me. [62:38] >> I went to Georgia, so that's never going [62:40] to be my least favorite. [62:41] >> Right. Exactly. And then now it's [62:42] pitbulls. Right. And statistically, [62:44] actually, I think most bites come from [62:45] chow. [62:46] >> At least my uncle who's a vet tells me [62:48] that. But um chow owners I met some nice [62:50] chows. The blue tongue is pretty cool. [62:52] >> And that's a particular variant you can [62:54] imagine. Yeah, there's a there's color [62:56] is one of the things that's best [62:58] understood I think especially in [62:59] domestic dogs. There's so many genomes [63:00] and all these things have been mapped. [63:03] Um and that's part of what we have to do [63:05] in all these cases is is how do we [63:07] figure out what it is that causes the [63:09] thyloine to have the stripes that it has [63:10] or causes the particular types of hair [63:14] development that happen on a woolly [63:16] mammoth. These are all huge open [63:17] problems in in evolutionary biology that [63:20] I get to work on every day in my job. [63:23] >> Clearly you have clearly you have the [63:24] the the [laughter] right job. So you [63:26] have these three direwolves. They're not [63:29] mating. Is the plan to make more of them [63:32] to mate them? What's what's the ultimate [63:34] goal and intermediate goal? [63:36] >> We will have another pack so that [63:39] hopefully they will all be born more of [63:40] them at the same time so that that's the [63:43] plan eventually. It's not our priority [63:44] right now. We're working on other [63:46] species. But what we'd like to do is [63:47] have another pack in the space where we [63:49] are so we can really better understand [63:50] the impact of the animals on the [63:52] ecosystem. This is really the next [63:55] rational logical step in any [63:56] deextinction project. I often hear [63:58] rumors that what are you doing? You're [64:00] just going to take get an elephant and [64:02] uh make a mammoth and just release it [64:04] into Alaska? And you're like no. Um [64:07] first of all, no. cuz it's going to be [64:09] so hard to make that first mammoth that [64:11] I'm going to want to make sure that it [64:12] is safe and cared for and has access to [64:15] all the [64:16] >> Jurassic Park thing again. [laughter] [64:18] It's that they break out, right? [64:19] >> But also, you know, you can't do that. [64:21] We exist in the reg regulatory [64:24] environment of anywhere that these [64:25] animals are. It's it's not that we're [64:27] some crazy scientists on an island like [64:29] in Jurassic Park. You know, we we work [64:31] here. We have Ayakok protocols and um if [64:34] you're doing anything that is releasing [64:36] animal outside you're under the [64:38] regulatory purview of a whole bunch of [64:39] different agencies. I don't know if you [64:40] saw but the very first geneedited [64:43] organism created specifically for the [64:46] purposes of conservation ecosystem [64:48] restoration was deregulated by the USDA [64:52] this week. It's the American chestnut [64:54] tree. And the challenge with any of [64:57] these genetically modified organisms [64:58] that we have which we're creating [65:00] synthetic [clears throat] biology uses a [65:02] tool to make these things better. The [65:03] chestnut tree is one of these stories [65:06] like the passenger pigeon where the [65:08] American chestnut was the most prolific [65:11] tree across the eastern forests of North [65:13] America all the way through North [65:15] America until the early part of the 20th [65:17] century when a disease was introduced [65:20] believed to be on an import of a Chinese [65:23] chestnut tree that caused a fungus to [65:26] get into these trees and they all died. [65:28] But it took a decade and a billion trees [65:32] died. [65:33] >> This scares me for a variety of reasons. [65:35] A few years ago, this would be 2016, 17, [65:39] I got this strange envelope in the mail [65:41] to my residence. Do you know about this? [65:43] No, but I'm [65:43] >> So there was a So I was living in the [65:45] East Bay, California, and I get this [65:47] envelope and it contains a little kind [65:50] of like looks like a small quarter size [65:53] plastic like container just thin an [65:55] envelope and I had a little note and it [65:57] said free seeds for gardening. Oh [65:59] >> and I was like this is really odd and I [66:01] started you know fishing around on the [66:03] internet. Turns out the idea was that [66:06] massive amounts of seeds were being [66:07] shipped from China and sent here. Now, [66:09] this isn't a conspiracy, right? Like, if [66:11] you look at this, there are these this [66:13] is sort of attempt to just kind of like [66:15] put new populations of plants and maybe [66:17] it was all benevolent. And my friends, [66:19] actually, one of whom is down at Santa [66:21] Cruz. Yeah, I know some plant [66:22] biologists. They were like, "Whatever [66:23] you do, do not put that into the ground [66:25] outside because these things travel, [66:27] birds eat them, birds poop, and then [66:30] stuff gets grows. And this is how you [66:32] can decimate important populations of [66:34] trees and plants." It was the first time [66:35] I really thought about vegetation on [66:38] vegetation warfare. Is that what is [66:40] actually what was happening? Is it was [66:42] this the Chinese trying to do this? We [66:43] don't know. But what is very important [66:45] is that anytime you plant something, you [66:47] actually want to talk to the people who [66:49] understand how different ecosystems of [66:50] plants coexist in the same way that you [66:53] wouldn't put your wolves out into the, [66:55] you know, into the dog park. [66:56] >> I wouldn't put the wolves out because if [66:58] if we release direwolves, they would [67:00] compete with greywolves. And greywolves [67:01] are already having enough trouble trying [67:03] to find a way to survive. And so there's [67:05] no need there's no ecological need to [67:07] release greywolves into the habitat and [67:08] so we can use them to study these. But [67:10] if you think about what you just said, [67:12] right, I I think [67:14] >> people we as a lineage have been messing [67:19] with the evolution and of the stuff [67:21] around us for as long as we've existed, [67:24] right? Initially just by driving things [67:26] extinct. Not deliberately, right? like [67:28] just like maybe this wasn't a deliberate [67:30] attempt to [67:31] >> have some plants that would out compete [67:33] other things, [67:34] >> but we did and we changed ecosystems by [67:37] going into them and and getting rid of [67:38] all the largest animals that were there [67:40] because we were hunting them. I'm [67:42] thinking about, you know, our ancestors [67:44] in, you know, 50,000 years ago in [67:46] Australia, 30,000 years ago in Asia, and [67:48] then we domesticated things and and now [67:51] we we conserve things. And when people [67:53] think about conservation, a lot of [67:55] people have this idea that it's this [67:57] beautiful thing where you're just [67:58] leaving everything alone. But that's not [68:01] what we're doing. We are deciding how [68:03] many of them get to live, what they get [68:05] to eat. We vaccinate them. We protect [68:06] them from predators. We I'm not saying [68:08] that is bad, but I think it's naive to [68:11] say that it's not us determining what [68:12] the future of these animals are. And [68:14] we've also been moving stuff around [68:17] forever. Like we have English birds all [68:20] over the place here and in New Zealand [68:21] that were brought by people because they [68:23] liked them, right? They liked them where [68:25] they were. And I think it's a mistake to [68:28] imagine that the only good ecosystem is [68:30] the one that you know right now because [68:33] you're you're claiming a particular [68:35] slice of history as the thing that is [68:38] better than everything else. And I think [68:40] it's more important to think in terms of [68:42] robustness. And you said, well, go back [68:45] to the beginning. You you said something [68:47] about how when we have multiple things [68:50] happening, multiple species in in an [68:52] ecosystem that are all doing different [68:54] things, you end up with more [68:55] biodiversity and richer environments. [68:57] When there's an overlap in ecological [68:59] nest, there's some redundancy there. And [69:01] that redundancy is really good for that [69:04] ecosystem because it means that bad [69:05] stuff can happen and it can weather that [69:08] bad stuff. [69:09] So maybe we shouldn't always think in [69:12] terms of bringing in something new is [69:14] bad. [69:14] >> I should have planted the seeds. No, I'm [69:16] totally on board what you're saying when [69:18] I um [69:18] >> I don't mean to plant the seeds. I just [69:20] >> No, no, no, no. I'm totally totally on [69:21] board with what you're saying. It it [69:22] touches on an important theme that we've [69:24] certainly never discussed on this [69:25] podcast, but is very relevant to today's [69:27] discussion and that people should think [69:29] about, which is, you know, who gets to [69:31] decide. It's interesting because there's [69:33] both a kind of like massive ego inserted [69:36] into the notion that like we know best [69:37] about everything in including the other [69:40] all the other species of plants and [69:41] animals. That's obviously not true. But [69:44] also that we don't have anything to [69:46] contribute in terms of our own evolution [69:48] that is I mean look here you're a human [69:50] being bringing back species of past and [69:54] some people might think scary other [69:56] people might think fantastic. I think [69:58] why it's hard for people to wrap their [70:00] head around these things and they [70:01] default to thinking about oh it was [70:02] better in the past is because a most pe [70:05] people never experienced that they have [70:07] no concept. I think there's a great book [70:08] that I had to read years ago called uh [70:10] the good old days they were terrible [70:12] about we hear the good old days and you [70:13] hear about all like the dysentery the [70:14] lack of antibiotics like but we tend to [70:16] look back and say oh that was it must [70:18] have been so nice back then everything [70:20] buolic and beautiful and you forget all [70:22] the the the dark side of that [70:23] >> but the other one is that we don't have [70:25] a window into the future [70:26] >> right [70:27] >> and so you know I went to school in [70:28] Santa Barbara and one of the first [70:30] things you learn there is that there are [70:31] all these species of fox that are out on [70:33] the the Anakappa island and and Santa [70:35] Rosa Island and all these islands that [70:37] the Schumash brought out there on boats, [70:40] but no one says they don't belong there. [70:41] They say there's this incredible [70:42] biodiversity out there, which is why [70:44] it's protected, why we don't have, you [70:46] know, a lot of tourists walking around [70:47] out there. We want to protect that. But [70:49] humans brought those out. But the fact [70:51] that it was Native Americans and it was [70:52] and it was some time ago leads to our [70:55] percept like it was good, right? And so [70:57] the idea that we would remove them, no, [70:59] we need to protect them. And that makes [71:01] total sense to me, but it's a default [71:02] psychology that I think is driving a lot [71:04] of the quote unquote ethical [71:06] conversations around this because we [71:08] don't have a window into the future. So [71:09] let's say these dire wolves, you make [71:11] more of them. I can get totally on board [71:13] the idea that then they're wildlands [71:15] that they are roaming that then they're [71:18] serving other populations of animals and [71:20] plants. There's new interactions that [71:21] are that are benevolent interactions [71:24] that are pro-evolution as opposed to [71:25] devolution. I think the challenge for [71:27] people is we don't know what that looks [71:30] like and it feels like there there too [71:32] many variables to understand. So I'm [71:34] just wondering how you wrap your head [71:36] around that when you're talking to [71:37] people about what you do and and when [71:39] you're thinking about what you do. [71:41] >> I'm thinking in terms of helping [71:43] ecosystems to become more resilient. We [71:47] know, for example, because of what [71:50] happened in Yellowstone, the impact that [71:52] restoring the top predator of an [71:54] ecosystem that had been removed can [71:55] have. The grey wolves that were [71:57] reintroduced into Yellowstone, the [71:59] population of animals that they ate had [72:02] become too large and they had eaten away [72:04] at all of the shrubbery. And so putting [72:07] the greywolves back in Yellowstone [72:09] cascaded all the way down that ecosystem [72:12] ladder to changing the way the rivers [72:14] were flowing because the plants were [72:15] growing back now along the edges of the [72:17] rivers. The thyloine, which is the [72:19] Tasmanian tiger, this is the second [72:22] species that Colossal declared as one of [72:24] our de-extinction targets. Um the [72:26] thyloine was the top predator in [72:28] Tasmania. And Tasmania today has [72:33] problems because that top predator is [72:36] missing. Have you heard about or seen [72:38] the awful pictures of the Tasmanian [72:40] devil facial tumor disease? [72:42] >> Yeah, this came up um on a few podcasts [72:44] ago because we had Jared Rudder who's a [72:46] another Hughes biologist where some [72:49] mitochondria and we're talking about [72:50] they're no transmissible cancers, but [72:52] these Tasmanian devils um have wound [72:54] induced cancer-like problems. So they [72:57] fight, they scratch each other up, they [72:59] get cancers, and that that population is [73:01] suffering as a consequence. [73:03] >> And they're so closely related to each [73:05] other that they can pass them between [73:06] each other. [73:07] >> Oh, so it's the genetic similarity that [73:09] allows that to happen. [73:10] >> The point is that I Yes, this is [73:12] terrible. But if [clears throat] we had [73:14] had the top predators, those sick [73:16] individuals would have been weeded out [73:18] of that population and we might not have [73:20] this problem. So you can see restoring [73:22] that ecosystem. [73:24] And also I'll get back to, you know, I [73:27] often get the question of why are you [73:29] thinking about bringing extinct species [73:30] back to life? Why aren't you thinking [73:33] about helping living species not become [73:35] extinct? And the answer is we are doing [73:38] both. It is the same tools. It's the [73:41] same technology. It's the same needs. [73:44] And when we excite people with the idea [73:48] of mammoths and dodos and thyloines, we [73:51] get more engagement and enthusiasm and [73:53] investment in developing the technology [73:55] that we can use to stop living species [73:57] from becoming extinct. There's a really [74:00] great story. Our colossal Australia [74:01] partners have been working on a project [74:04] to try to stop the northern qual from [74:07] becoming extinct. Have you ever heard of [74:08] familiar with the qual? Most people [74:09] won't. [74:10] >> It's qu L l. So it's a little guy. [74:12] They're adorable little cute [74:15] >> carnivorous marsupials and they eat [74:18] >> amphibians. And in Australia, there is [74:21] an introduced amphibian called a cane [74:24] toad that is toxic. It's toxic to dogs. [74:27] When dogs eat them, they die. It's toxic [74:29] to everything. When a qual eats a cane [74:31] toad, it dies. And that's terrible. And [74:35] there is a very strong chance in the [74:37] next few decades the northern qual is [74:39] going to become extinct. However, there [74:42] is a synthetic biology solution to this [74:44] and it's one that has actually already [74:46] been made, right? There are mammals that [74:49] eat toxic toads that live on the other [74:52] side of the planet even that eat cane [74:53] toads, right? And they have a single [74:56] letter change that changes one amino [74:58] acid in one gene that allows them to eat [75:01] that toxic cane toad and not die. Our [75:03] Australia, Colossal Australia partners [75:05] have made those changes in a coal. And [75:08] when you measure in a dish, the ability [75:10] of that toxin to break down the cane [75:12] toad, that single letter change to that [75:14] qual's genome could allow that qual to [75:17] avoid becoming extinct, but to eat cane [75:20] toads, which currently nothing really [75:22] can in Australia. So now we can see the [75:26] real benefit of this massive comparative [75:29] biology framework. I know which gene it [75:31] is that I need to change. The stack that [75:33] allows us to develop the tools to be [75:34] able to make that change and just that [75:36] change and then show that that's the [75:38] only change that's there. You've made [75:39] what [clears throat] you wanted to do [75:40] and then put that in a living animal can [75:43] stop a species from becoming extinct. [75:45] >> I'd like to take a quick break and [75:47] acknowledge our sponsor, Function. [75:49] Function provides over 160 advanced lab [75:52] tests to give you a clear snapshot of [75:54] your bodily health. This snapshot gives [75:56] you insights into your heart health, [75:58] your hormone health, autoimmune [76:00] function, nutrient levels, and much [76:01] more. They've also recently added access [76:04] to advanced MRI and CT scans. 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[77:23] As someone who does a lot of public [77:25] science health education interaction, I [77:27] there there are a couple things that get [77:29] the public really worried and that they [77:31] need reassurance on. Honestly, I think [77:33] it dates back to the pandemic. [77:35] >> There's a lot of distrust about [77:37] scientists. There is this belief that [77:39] some scientists are only concerned with [77:41] themselves. M it's an important myth in [77:43] my opinion to dispel the idea that most [77:45] scientists are not what I believe them [77:47] to be which is they're trying very hard [77:50] to get answers right to do good for the [77:52] world including other species and it [77:55] they're not so careerist that they're [77:57] willing to overlook that independent of [77:59] the IRB boards and the thing that the [78:02] the constraints that force them to to do [78:04] that but that is the era we're living in [78:06] right so I think that some people think [78:08] more now in terms of you know scientists [78:10] are like doing stuff because they And [78:12] this has parallel conversations about AI [78:14] where people are think like hey like [78:15] have we really thought this one through [78:16] and people are are scared but I totally [78:19] agree with with what you're saying and I [78:21] want to talk about two species to try [78:23] and highlight this and how it can be [78:25] done right because I I think it's clear [78:27] that you're trying to do this right [78:29] [snorts] which means for the the best [78:31] possible outcomes for humans and other [78:33] species and the first are mosquitoes [78:35] >> and the second are humans. Most people [78:37] don't care about mosquitoes, but some [78:40] years ago, I started paying attention to [78:42] mosquitoes because your very own Howard [78:45] Hughes director now, I think Leslie [78:46] Bosall, works on the old factory system [78:49] of mosquitoes and other insects. And [78:51] turns out bugs find mates and find [78:54] things to suck blood from and etc. by [78:58] odors and pherommones, but odors. And so [79:00] there this idea, oh, mosquitoes have [79:02] malaria. This wasn't Leslie's idea, but [79:04] it was like, um, mosquitoes have [79:05] malaria. let's just get rid of all the [79:07] the mosquitoes, [79:08] >> right? [79:08] >> And the biologists were like, "No, you [79:10] can't do that cuz then the birds are [79:11] going to suffer cuz they eat the [79:13] mosquitoes." And on and on and on. I [79:14] mean, this stuff can really domino. And [79:16] it sounds like a great idea. It's a [79:18] terrible idea. [79:19] >> Or let's just make mosquitoes that can't [79:21] reproduce. That's a great way to do it, [79:23] right? [79:24] Or let's just do an half of them, right? [79:26] There were these ideas just kind of [79:27] thrown out there that with genetics, you [79:29] can do that. You just release a few of [79:31] these little suckers into the wild and [79:32] there is the potential that they mate [79:34] and proliferate and just enough to [79:37] eradicate a population or half a [79:38] population. It's harder to do than that. [79:40] So people didn't know this was like [79:42] being explored, but smart people put the [79:44] brakes on it. So let's talk about [79:46] mosquitoes. Like it they clearly carry [79:49] pathogens that harm people, but they're [79:51] also important for ecosystems, vitally [79:54] important for certain ecosystems. So, [79:56] how do you think about plucking out a [79:59] node in an ecosystem like a species or [80:01] introducing a a species back into an [80:04] ecosystem and thinking about the [80:06] ramifications? It's hard to model [80:07] behavior in one species, let alone [80:09] interactions between species. How do you [80:11] wrap your head around that with the [80:13] maybe the mosquito would be a I hope a [80:15] simple example of this. [80:17] >> Mosquitoes are a hard one and I think [80:19] that they do cause a lot of death and [80:22] disease, but not all mosquitoes. So the [80:25] you know only certain species of [80:26] mosquitoes carry malaria and deni and [80:29] other diseases that are known to affect [80:31] people. And also those mosquitoes have [80:33] much higher population density because [80:37] of the way that people have built our [80:39] towns than they would have had in [80:42] natural ecosystems. So for something [80:44] like a mosquito that is extremely [80:46] overpopulated and carrying a devastating [80:48] disease, I would think that there [80:50] actually is reason to think that it is [80:52] safe in an ecosystem to at least bring [80:55] that population back down to a size that [80:57] it would have been in a natural [80:58] ecosystem. A lot of problem with [81:00] mosquitoes is because people leave just [81:02] tubs of water or water that isn't [81:04] circulating out and they lay a billion [81:06] eggs and then you have many more [81:07] mosquitoes. That's not true in the [81:09] Arctic. In the Arctic there's a [81:09] bazillion mosquitoes and no people and [81:11] it's really miserable. That's uh I've [81:12] spent a lot of time in my life. [81:13] >> Yeah, I heard you describing that [81:14] elsewhere and it sounds horrible. [81:16] Someone I do not like mosquitoes. I [81:18] don't like mosquito bites. And I get it [81:20] like at first blush and like get rid of [81:22] all the mosquitoes, but it's a lot more [81:24] complicated than that. [81:24] >> Maybe engineer mosquitoes that they [81:26] can't carry the disease rather than [81:28] engineer the mosquitoes to be dead. I [81:30] mean, there are ways that I think we can [81:31] use synthetic biology and gene drives as [81:33] the thing you were getting at where you [81:35] release something that is created by a [81:37] synthetic drive into the wild and then [81:39] it passes on to the next generation. I [81:41] actually think that gene drives are an [81:43] incredibly powerful way that we have at [81:46] our fingertips where with the [81:47] appropriate safety measures and care in [81:49] place, we should think about how we [81:51] might deploy these tools. You can make a [81:53] gene drive so it only lasts for a fixed [81:56] number of generations. And also because [81:58] they tend not to make things reproduce, [82:00] there is incredibly strong natural [82:02] selection against them. Anything that [82:04] breaks a gene drive and lets something [82:06] reproduce is going to be favored in a [82:07] population, right? Um, so gene drives [82:10] are going to be difficult to get to [82:12] persist and there are many switches that [82:13] we could build into them to make them [82:15] last for a short period of time. But [82:17] there are some species that have taken [82:20] over and you talk about your plants that [82:22] you got in in this part of the world. [82:24] There's cheat grass everywhere and it's [82:25] highly flammable and it grows along the [82:27] roads and it's Mediterranean in origin. [82:29] And the only way we are ever going to [82:32] get the cheat grass down enough to be [82:34] able to let the native California [82:36] grasses come back is if we get rid of [82:38] the cheat grasses for a few generations. [82:40] And [82:40] >> do you think this is one of the reasons [82:41] there's so many fires? [82:43] >> They're very flammable and they also [82:44] don't have very um deep roots. So in [82:47] California, it's very dry, right? [82:49] California native grasses have much [82:50] deeper roots and so they stay green [82:52] longer. So they're sequestering carbon [82:54] and they're not as flammable for longer [82:55] into the season. these these shallow [82:57] rooted Mediterranean grasses dry out [82:59] super quickly. So as soon as it's fire [83:01] season like it is now, they're ready to [83:03] go, right? And it's not just here. It's [83:04] all across the western part of North [83:06] America. And this is a problem. And it's [83:08] a problem because it causes huge amounts [83:11] of damage to forest ecosystems, huge [83:13] amounts of property damage when fires [83:14] take off and they're out competing these [83:16] grasses. This is a situation where I [83:17] would say, let's think about how we [83:19] might safely deploy something like a [83:22] gene drive that can remove something or [83:24] at least tamp something down enough to [83:26] allow that ecosystem to become again [83:28] once again more robust and resilient. As [83:31] far as you know, what do we think about [83:33] adding things back into an ecosystem? [83:36] This is one of the reasons that every [83:38] de-extinction project or every species [83:41] transllocation project is staged and [83:44] thoughtful. When people moved Texas [83:46] panthers into Florida in the mid 1990s [83:49] to try to stop Florida panthers from [83:51] becoming extinct, they had developed [83:54] crooked tails and cowicks and crypt [83:56] orchidism. Their testicles didn't [83:58] descend and they were going to become [84:00] extinct. This was an inbreeding [84:02] depression. There were only a few [84:03] individuals, so they only bred with [84:05] individuals they were related to. There [84:07] was no choice. You bring in the Texas [84:09] panthers and the panthers recovered. All [84:11] of these diseases disappeared for a [84:13] short period. Now they're inbreeding [84:15] again because the population is cut off [84:17] from Texas and so they'll have to keep [84:19] doing it. We have to be the stewards of [84:21] these ecosystems that we're creating. [84:23] But that's in our power. We can do a ton [84:26] of analyses about potential risks and [84:29] rewards of what might happen when we [84:32] modify an ecosystem. And we do it all [84:35] the time. Sometimes to good ends and [84:37] sometimes to bad ends. What we can't do, [84:40] and I think this is sometimes where [84:43] the conversation gets lost, is if you [84:47] look around, we see habitats around the [84:50] planet that are suffering because of [84:55] changes that people have made. Within [84:58] those habitats, there are species that [85:00] are teetering at the edge of extinction. [85:04] And the only strategy that they have to [85:06] survive is natural selection, evolution [85:08] and natural selection. The rate of [85:10] change of these ecosystems is too fast [85:13] for that to work. If we say these [85:17] technologies that we have whether it's [85:18] transllocations or assisted reproduction [85:21] or genetic modification and synthetic [85:23] biology and deextinction [85:25] if we say that those technologies are [85:28] too risky [85:30] we are accepting the outcome of doing [85:33] nothing which is also a decision and I [85:36] think that's where a lot of times the [85:38] conversation gets lost doing nothing is [85:41] not not deciding doing nothing is saying [85:44] we accept the fact that we are going to [85:46] have a future that is less biodiverse [85:48] than the present. [85:50] >> It's amazing how people are perfectly [85:52] happy to allow the negative default [85:55] outcome to emerge even though it's the [85:58] consequence of humans but they are wary [86:00] of humans intervening to a potentially [86:04] better outcome. I think it gets back to [86:06] this issue of trust in scientists and it [86:08] also raises the question of who decides. [86:11] I'm very opinionated about this when it [86:13] comes to public health policy. I think [86:15] what the pandemic taught us regardless [86:16] of where people sat on vaccines and [86:18] lockdowns if nothing else it taught us [86:21] something absolutely essential which is [86:23] you can't have one person be the [86:24] spokesperson right [86:25] >> people need to hear from a group [86:28] including the denters in that group [86:30] >> and why they arrived at a particular [86:32] decision [86:33] >> I should be clear for all of the species [86:35] that we're working on we have advisory [86:38] panels that are built from local people [86:39] we have the Tasmanian advisory panel [86:41] that has politicians and people who grow [86:45] forests to log them and people who work [86:47] with the animals and people who are [86:49] scientists and conservation biologists [86:51] and we have regular meetings with all of [86:53] our different advisory groups to talk [86:54] about what the future might look like [86:56] well before we have a philyloine to be [86:59] able to to release anywhere. Our MOA [87:02] project is led by the Nitahu Research [87:04] Center in South Island of New Zealand. [87:06] And these Maui people are the people who [87:08] will be the long-term stewards of the [87:10] MOA. And the decision about how many to [87:12] make, which MOA to make, where to [87:14] release them, how to release them, it's [87:16] it's their decision um in consultation [87:19] with other people who will be impacted [87:20] by this. And I think that's really [87:22] important. The other thing that I think [87:23] we do well is this, right? I mean, I am [87:27] not a scientist hiding up in an ivory [87:30] tower somewhere. I'm here talking to you [87:32] and talking to as many people as I can [87:35] to tell people all about what we're we [87:37] even get yelled at for this. Why is [87:38] Colossal always talking about what [87:40] Colossal is doing? Well, would you [87:41] rather we not tell you? I mean, [87:43] >> I think the education piece is the [87:44] critical piece. I think it's great that [87:46] Colossal is doing this. [87:48] >> I mean, it is true. I I think we are all [87:50] desperate for when the direwolf story [87:54] broke and there was a small subset of [87:57] scientists who were just yelling at me [87:58] that I wasn't allowed to call it a [87:59] direwolf. And there are a bunch of [88:00] people who were like, "Wow, I can't [88:02] believe you learned from a bone and [88:04] actually use the tools of synthetic [88:06] biology to engineer extinct traits into [88:08] a living animal and now you have living [88:10] direwolves." Right? And there were [88:12] people who were scared of it and people [88:13] who loved it. And there were a bunch of [88:16] people who said the word extinction and [88:18] synthetic biology for the very first [88:20] time in their lives. And I got emails [88:22] from my colleagues at universities who [88:24] said the undergraduates were coming into [88:26] their ecology classes and their [88:29] sociology classes, their anthropology [88:30] classes. Some of them were mad and some [88:32] of them were excited, but they were [88:34] talking about it. And they were talking [88:36] about it as if they had some agency in [88:39] the world that they were inheriting. And [88:41] we hear that from middle schoolers and [88:43] high schoolers. And I think that is [88:44] really something tremendous about what [88:46] we're doing. People need to feel excited [88:50] and positive and they need to feel awe. [88:52] And when I saw the direwolves for the [88:55] first time, that's what I felt is [88:57] genuine awe, right? And there's [88:59] something about that that just makes the [89:02] world a better place. It makes people [89:04] happier and healthier. And I love that I [89:06] get to talk about it and do this hard [89:08] science, like really hard science, with [89:10] a bunch of smart people every day. As [89:13] long as we're waiting into deep water [89:14] here, let's talk about the really deep [89:16] water, uh, which is humans. [89:18] >> Okay, [89:19] >> so we have this thing called IVF [89:24] >> where people can make embryos and select [89:26] what are deemed at this point healthy [89:28] versus unhealthy. So people are doing [89:30] genetic selection in humans through [89:31] technology, right? People don't really [89:34] stop too often and think, oh yeah, you [89:36] know, how is that disrupting the human [89:38] ecosystem in any different number of [89:40] ways? But a few years back there was a a [89:43] guy in China actually who had been a [89:46] postoc at Stanford who decided to use [89:48] gene editing to modify the genome of [89:50] some babies disrupted the HIV receptor [89:53] and there are two stories about this. I [89:55] don't know which one is true. One story [89:57] is that they did it for benevolent [89:59] reasons to prevent these babies from [90:02] getting HIV from an either an infected [90:05] parent or to just protect them against [90:06] >> father was HIV positive. The other story [90:09] that was running in parallel was that [90:10] there was that this uh modification [90:13] uh might have some impact on hippocample [90:16] or other brain circuit function that [90:18] might make them hyper intelligent in one [90:20] dimension. So this was kind of more of [90:21] like a eugenics experiment. That was the [90:23] idea. And it was very interesting how [90:25] this emerged. Not in the general public, [90:28] like that was interesting in its own [90:29] right, but there was this short moment [90:31] of about a week where it wasn't clear if [90:33] this guy was going to win a Nobel Prize [90:36] and be celebrated or was going to be put [90:38] in prison. [90:39] >> Yeah, I remember this. It was Antonio [90:41] Regalado broke the story about a week [90:42] before the big crisper conference. [90:44] >> Yeah. There were these emails that [90:45] suddenly came out and and it was very [90:47] clear like people were kind of tap [90:48] dancing around this guy like what's [90:49] going to happen to him? do I want to be [90:51] associated with this and glean some of [90:53] the benefit or is he going to be [90:55] demonized in which case I want nothing [90:57] to do with this guy he's like he's he's [90:58] blacklisted and turns out it was the [91:00] latter right and the Chinese government [91:02] said yeah we're going to shut down his [91:04] lab he's going to be punished [91:07] >> I don't know what's happening if he's [91:08] running experiments or if he's in prison [91:09] or what's happening but but this was so [91:11] interesting right because since then [91:14] there's been no fewer than four major [91:16] companies launched for deep sequencing [91:19] of embryos [91:20] both from IVF but also nonIVVF babies [91:24] and I have people coming up to me [91:27] saying, "Hey, guess what? [91:28] [clears throat] We just got to screen [91:30] these embryos and we were told which of [91:33] them is going to have the highest IQ and [91:35] which of them is going to be tallest and [91:36] which of them is going to be this and [91:38] which one and that." And so some of [91:40] these companies are geared towards [91:41] ruling out disease, [91:42] >> right? [91:43] >> Others are geared towards trying to [91:44] optimize for best possible outcome. [91:48] Right [91:48] >> now, this gets people riled up because [91:50] it's very expensive at this point. So [91:52] that has other implications, [91:53] >> right? [91:54] >> And it's easy to say, oh well that's [91:56] like eugenics. But when people select [91:59] who assuming they do it voluntarily who [92:01] to have children with, they're selecting [92:03] on the basis of a number of features. [92:06] some physical, some emotional, some [92:09] resource related, some cognitive, you [92:12] know, and so [92:13] >> there's a lot of this happening happens [92:15] in the animal kingdom and in humans it's [92:18] happening now at the level of genetic [92:20] sequencing. And I think we're headed for [92:23] big discussions about ethics about [92:25] changing quote unquote ecosystems, [92:27] >> right, [92:27] >> through genetic selection of humans. [92:29] It's started. It's happening. There's a [92:31] really fascinating story that comes [92:33] partly out of ancient human DNA [92:35] literature and speaks directly to this [92:37] this idea that I think we feel [92:39] uncomfortable with things. We feel [92:40] comfortable with new technologies [92:42] initially because there's kind of this [92:43] reptile brain thing going on where first [92:44] we have to decide if we're scared of it [92:46] before we can decide if we're curious of [92:48] something, right? So there's initial [92:50] push back there. But we are doing as you [92:53] say genetic selection on humans by [92:57] choosing our mates and [93:01] it makes us uncomfortable even to think [93:03] about that. But here is a relatively [93:06] benign example to show that that's true [93:09] and it has to do with human height. [93:11] Right? So we know unlike IQ which is [93:15] very difficult to pin down which bits of [93:17] your genome mean IQ and IQ is measured [93:20] by what and what are you at and it's [93:21] different in different cultures and so [93:23] that's hard but height is relatively [93:25] easy and we know that it's heritable. So [93:27] we know that there's bits in your DNA [93:29] that can mean that you're tall or short. [93:30] I'm 5t tall, so I didn't get any of the [93:32] tall genes, right? I'm little. But we [93:35] know now by looking at the ancient human [93:37] DNA that in Europe at least where [93:39] there's a lot of very tall people in [93:40] Northern Europe, right? The the Dutch [93:42] are extremely tall. I remember going [93:44] >> going to the Netherlands and imagining [93:46] that I was going to be like speciating [93:47] there where I would be walking in [93:48] between people as they were above me, [93:50] you know, like but like driving a tiny [93:51] car where with a lot of big trucks on [93:53] the highways and anyway, that's kind of [93:55] what I feel like when I walk around in [93:56] the Netherlands. [93:56] >> The Dutch are very tall, very kind, but [93:58] very tall. [93:58] >> Very tall. But we know that a lot of [94:00] these genes were first introduced into [94:02] Europe with the step people at about [94:04] 4,700 years ago at the Yam Nia and that [94:06] originally they were migrating and for a [94:09] long time we thought that people were [94:11] just getting taller because of [94:12] environment. They were learning more [94:14] about health. They're learning more [94:15] about what they should eat. And yes, [94:16] there is some truth to that. But height [94:18] in Northern Europe has kind of plateaued [94:20] now and people have reached what seems [94:22] to be the tallest you can be with this [94:24] set of genes that exist in people today. [94:27] But it is there. It's in Northern [94:29] Europe. It's it's not in other parts of [94:31] the world, right? And so there is human [94:34] genetic selection for a trait that we [94:36] can visibly see that makes people look [94:38] different from each other. That isn't [94:40] because somebody's picking an embryo and [94:42] a sperm in a dish. So we would be naive [94:44] to imagine that it doesn't happen, that [94:46] it hasn't happened throughout our [94:47] evolutionary history, or that we can [94:49] control it. But I think what offends us [94:51] about it, this innate reptilian brain [94:54] part of us, is that while we don't care [94:58] that a Chihuahua and a boxer we pick, we [95:03] engineer to have different traits [95:05] because they have different roles in the [95:08] society because we have created the [95:10] roles for them in society. We created [95:11] them. They were once greywolves. We like [95:14] to think of people as not having niches [95:17] to fill, as having some freedom of [95:19] choice, to be able to pick what they [95:20] want to do and what they want to be. And [95:23] this idea that one generation might do [95:26] something to take that away from the [95:28] next generation just sits really [95:30] uncomfortably with us. It's wonderful [95:32] that you're doing public education on [95:34] these things because I think people [95:36] really need to understand that um there [95:37] are well-meaning scientists who are not [95:39] just trying to figure out you know what [95:41] would happen if and I [snorts] think [95:43] that it's clear that there are going to [95:44] be more things like this right and so we [95:47] we have to navigate forward with that [95:50] similar to AI it's not going anywhere [95:52] just like smartphones aren't going [95:53] anywhere and and the question is what is [95:55] the best use of this the safest uses and [95:57] where can it evolve our our thinking in [95:59] our lives in really unforeseen ways in [96:02] unforeseen positive ways. [96:03] >> We're really only just beginning to see [96:05] this. I mean, you know the story of baby [96:07] KJ, the first child who was cured of a [96:12] genetic disease using the tools of [96:13] synthetic biology. This was a child that [96:15] was born with um ura cycle deficiency. [96:18] He his blood was building up in ammonia. [96:20] And because people scientists had done a [96:24] ton of research on this particular [96:26] condition and really understood a lot of [96:27] what was happening they were able to [96:29] identify the cause of this genetic [96:31] disease and then it was a collaboration [96:33] between academic industry NIH the [96:36] children's hospital Philadelphia where [96:38] he was born this huge collaboration came [96:40] together took six months designed a base [96:44] editor crisper base editor to target his [96:46] particular cells come up with a delivery [96:49] mechanism to get it into his liver, do [96:52] all of the testing that you need to do [96:53] to make sure that it's safe, and then [96:55] give him a crisper medicine, a bespoke [96:58] crisper medicine as a six-month old kid, [97:01] three times, and he is cured of this [97:03] disease and will live a normal life. [97:04] >> Amazing. And no one accuses those [97:06] doctors of playing God, [97:08] >> right? That's what's so funny. I I mean, [97:10] here I guess we're sort of exploring in [97:12] the background like what what [97:14] establishes [97:15] >> why is that not playing God in the same [97:17] way that anything is playing God? I [97:18] think we play God every day and you know [97:22] and in Judaism there's actually the idea [97:24] that you're supposed to take care of the [97:26] natural world out there. So you're [97:27] actually playing human in this case [97:28] instead of playing God when you're using [97:31] the tools available to you to actually [97:33] make the world and the people around you [97:34] better and healthier. When we took a [97:36] greywolf and decided we were going to [97:38] let its puppies live in our campsite as [97:40] hunter gatherers 30,000 years ago, we [97:43] were making a decision that impacted [97:44] another species. as we took tacente and [97:48] turned it into corn. Every decision that [97:50] we make about which populations of [97:52] species to protect and which not to [97:54] protect to decide to allow corals to [97:57] have this genetic modification so they [97:59] can survive in the habitat that we [98:01] changed by introducing cane toads. These [98:03] are all decisions we make that fall into [98:06] that category of exerting human [98:07] influence on the world. But the world [98:09] today is a human world. And the species [98:12] that live today and thrive today are [98:14] those that have figured out how best to [98:16] do that in the niches that we have [98:18] created for it. And we need to just deal [98:21] with that and get better at it. Use the [98:23] tools at our disposal. [98:25] >> Can I ask you about ferrets? [98:27] >> You can. [98:27] >> And I also want to talk about stuff that [98:29] lives underwater. That ecosystem has all [98:32] sorts of issues that it needs to deal [98:34] with. Humans probably have to intervene [98:36] really quick or we're going to be in [98:37] trouble. So ferrets, they're not rats, [98:39] they're carnivores, great binocular [98:41] vision, great hunters. But a few years [98:43] back, the blackfooted ferrets were [98:45] almost extinct. My understanding, this [98:49] might be wrong, was that it was that the [98:51] prairie dog population got out of [98:53] control when the numbers of blackfooted [98:56] ferrets were were diminished. And as a [98:58] consequence, the grasslands were being [98:59] eaten up like crazy. And that had all [99:01] sorts of downstream negative [99:02] [clears throat] consequences. So it was [99:04] important to reestablish the blackfooted [99:05] ferrets, not just cuz they're cute. And [99:06] my understanding is that it was one [99:08] ferret Scarface who sired like 300 [99:11] litters [laughter] uh or more and they [99:14] were able to resuscitate or at least [99:16] partially resuscitate the population. So [99:18] I'm curious which elements of that [99:20] recollection are false and also whether [99:24] or not there's any concern about [99:25] diversity given that it was one uh one [99:28] male siring all these all these litters [99:30] since you get a bunch of kits and [99:31] they're mating. But mating of close [99:33] relatives is bad for genomes for reasons [99:36] that sort of emerged earlier is you get [99:38] homozygosity. You get genes that are too [99:40] similar and then if you have most people [99:43] dominant alals, you know, where you only [99:45] need one copy, okay, uh that's a [99:47] separate matter. But when normally many [99:49] mutations, you need two copies recessive [99:51] alals. But if you get genes that are [99:52] very similar between brother and sister, [99:54] you're likely to have two recessive [99:56] alals and you get bad mutations and [99:58] >> you can get deformities and sterilities [100:00] and low IQ. It's a very interesting [100:03] thing that throughout all species [100:05] inbreeding is bad [100:07] >> to a point. The the island foxes, the [100:10] Channel Island foxes that you talked [100:11] about, this is a really fascinating [100:13] example of a population that was so [100:16] small for such a long time and lived in [100:18] a pretty steady environment with no [100:20] predators that they went through that [100:22] bottleneck where all of those bad [100:24] mutations were expressed and purged from [100:26] the population. And they have almost [100:29] identical genomes. They have almost no [100:31] genetic diversity and they are perfectly [100:33] healthy. Wow. Now I don't know if [100:35] something happened to that habitat if [100:37] they wouldn't be able to survive because [100:38] there's no diversity of if a disease [100:40] came in they would all be susceptible [100:42] rather than some versus not. [100:44] >> And that's a very protected region. I [100:46] know that because my college girlfriend [100:47] was environmental studies major and they [100:50] used to go out there and it's very [100:51] protected. You can't just like take a [100:53] boat and like stomp around the those [100:55] islands. [100:55] >> But it's fascinating. It is fascinating. [100:57] It is fascinating. In general, my [100:59] understanding is that reading with close [101:01] relatives is bad. Really bad. Certainly [101:03] for humans, which is why in Iceland and [101:05] Scandinavia, there's these incredible [101:07] genetic records dating back to when [101:09] there were fewer foreign opportunities [101:11] to mate with pe foreigners, right? We [101:13] were going to [laughter] be blunt about [101:14] it. So, what's the deal with these [101:16] blackfooted ferrets? Because it's an [101:18] example of this a dynamic tension [101:20] between trying to reestablish a [101:22] population and wanting enough genetic [101:24] diversity. [101:25] >> Yeah. And it's also a great example of [101:27] how we can use multiple tools um that we [101:29] have for genetic rescue simultaneously [101:31] to help a species. I should say that the [101:33] Blackfooted Ferret Project is not [101:34] something that I was personally involved [101:36] with. This is a project that's been a [101:38] collaboration of US Fish and Wildlife [101:39] and the San Diego Frozen Zoo and Revive [101:41] and Restore, which is a nonprofit [101:43] conservation organization. I was on [101:44] their board for a long time and they're [101:46] doing really fun work. But the story is [101:48] interesting. The story is that the [101:50] prairie dogs, which blackfooted ferrets [101:52] eat, were a real pain in the butt for [101:54] farmers. And so they wanted to get rid [101:56] of prairie dogs. And so they set out all [101:59] these ways of just trying to kill a [102:00] whole bunch of prairie dogs. And it [102:01] killed a couple of prairie dogs, but it [102:03] killed almost all of the blackfooted [102:04] ferrets in instead. And so we ended up [102:07] with a situation where blackfooted [102:09] ferrets were nearly extinct in the wild. [102:11] People brought them into captivity, but [102:13] they could not figure out how to get [102:15] them to breed in captivity. And [102:16] eventually the last captive animal died [102:19] and then the last wild animal died and [102:21] they thought the species was extinct. It [102:23] was actually on the I think it's the [102:25] class of 1966 the first list of [102:27] endangered species when the endangered [102:29] species act first passed. Blackfooted [102:31] ferret was but then like a decade later [102:34] Shep the family dog of a family that [102:37] lived outside of Matitzi Wyoming killed [102:39] a blackfooted ferret while it was out [102:41] one night. And the the story is that the [102:44] family took it in to a taxiderermist and [102:46] they were like we want this cuz it's [102:48] kind of cool. Like what is this? And the [102:49] dude was like uh uh I'll be back. And he [102:52] went back and called somebody and was [102:54] like I think we have a you know this [102:56] extinct species here. And it was proven [102:58] that it was a blackfooted ferret. So [103:00] there was a population that persisted [103:02] around Matiti Wyoming. people started [103:05] studying this population again and they [103:07] went and they collected a whole bunch [103:08] more individuals, brought them into [103:10] captive breeding and knew more about [103:12] this. It was a real international push [103:14] to figure out how to make these animals [103:16] breed in captivity. But then they [103:17] noticed that the animals in the wild [103:19] started to get sick and in a last stitch [103:22] effort to save them, they went and [103:23] collected every individual that they [103:25] could find in the wild. And I believe [103:26] one of them was Scarface who is the one [103:29] that eventually like bred with everybody [103:30] and ended up having a bunch bunch of [103:33] diversity. scarf face. He had a scar on [103:34] his little blackfooted ferret little. [103:36] They are so cute. I recommend everyone [103:38] who's hearing this. Look them up like [103:40] pictures. [103:40] >> Don't get one as a pet. Trust me. [103:42] >> So, this is a successful captive [103:44] breeding program and every year they can [103:46] release about 500 blackfooted ferrets [103:48] into the wild. But there are two [103:51] problems. The one is what you mentioned [103:53] and that is that there's not that much [103:54] genetic diversity. There were a handful [103:56] of founders in this population. All of [103:58] them were from the same population near [104:00] Matiti, Wyoming. So they're already [104:02] closely related to each other and over [104:04] time the amount of diversity in that [104:06] population is going to decline. So a few [104:09] years ago this collaboration of [104:11] organizations got together and said [104:14] there's a solution to this. In the [104:17] frozen zoo in San Diego there are tissue [104:20] samples from that original captive [104:22] breeding population unrelated to the [104:25] individuals that were in Matiti Wyoming. [104:27] So different genetic diversity. If we [104:30] could use cloning, the tools that we [104:32] will use to make mammoth, that we used [104:34] to make our direwolves, that most [104:35] famously was used to make Dolly the [104:37] sheep, we can take those skin cells and [104:40] turn them into a living blackfooted [104:44] ferret. [104:44] >> So, revert them to stem cells. [104:46] >> Not in this case. You just take an egg [104:48] that you've harvested from another one [104:49] and you inject the cell into the egg and [104:52] the proteins in the egg itself can do [104:54] that epigenetic reprogramming, which is [104:56] kind of like reverting, but you don't [104:57] need the Yamanaka factors. just need the [104:59] egg to do this. So, it becomes a cell [105:00] that starts to divide and become all the [105:03] different types of cells that make up an [105:04] animal. So, I think in 2020, Elizabeth [105:06] Anne was born. Elizabeth Anne was the [105:09] first clone of 40-year-old tissues from [105:12] an animal that had lived decades [105:14] earlier. She was not reproductive, [105:16] unfortunately. She was never able to [105:18] have offspring [105:19] >> by behavior or there was some biological [105:20] wiring issue. [105:22] >> There was some wiring issue. Her ovaries [105:24] weren't releasing the eggs or something. [105:26] I can't remember. spirits are are have [105:28] this induced ovulation thing too. They [105:30] have a kind of funny funny I mean to us [105:32] it's funny to them it's perfectly normal [105:34] >> but they did make another one and from [105:36] the same line and that animal has [105:38] reproduced and there were offspring from [105:40] that that can be able to be introduced. [105:41] So so here we have a solution to [105:44] introducing genetic diversity into a [105:46] population that had lost genetic [105:48] diversity on the path to extinction. [105:50] But there's another problem, and that is [105:53] that the thing that's actually killing [105:55] the blackfooted ferrets in the wild is [105:57] plague. [105:58] >> Bubonic plague. [105:59] >> Plague. Yes. [106:01] >> That's another reason you don't want to [106:02] have a ferret as a pet. [106:04] >> Well, definitely not a blackfooted [106:05] ferret. [laughter] I mean, the the [106:06] European I you don't want to send me off [106:08] on a thing. I had a pet ferret leave [106:11] many years ago and I don't you were [106:13] going exactly where I'm going. [106:14] >> Domesticated ferret. It was not the It [106:16] was not the blackfooted ferret. Domestic [106:18] ferrets are not susceptible to plague [106:23] and that susceptibility must have some [106:26] genetic underpinning. So if we can [106:29] figure out what that is and there are [106:31] several hypotheses that different teams [106:33] are working on right now, we could use [106:35] the tools of synthetic biology, genetic [106:37] engineering to edit the genome of these [106:39] blackfooted ferrets and make them [106:41] resistant to plague. So, not only use [106:44] cloning, a form of genetic rescue, but [106:46] then also synthetic biology to create [106:48] animals that are able to survive in this [106:51] habitat despite that people have mucked [106:53] with that habitat in a way that makes [106:54] their survival hard. We can use these [106:57] same tools for for lots of different [106:58] things. We have a project related to our [107:00] dodo project with the maritian pink [107:02] pigeon. Another [107:02] >> is it actually pink? [107:03] >> It's pink. It's very pink. Um, [107:05] >> when you pick cool animals to wear, [107:06] you're like woolly mammoth, dodo bird, [107:08] pink pigeon. you [laughter] like you [107:10] know you guys know how to you know uh [107:12] get [107:12] >> part of part of it right dire wolf you [107:14] know [laughter] and the direwolf thing [107:16] my understanding is that it was also on [107:18] the heels of like the game of thrones [107:19] popularity so that that was like a piece [107:21] if you weren't going to make a dragon [107:22] you might as well make a very large wolf [107:23] because it has these kind of [107:24] connotations [107:25] >> when I was working on the first direwolf [107:27] genomes in way before I was involved [107:29] with colossal but the very first time we [107:31] published direwolf DNA we were desperate [107:33] to sync the publication with some editor [107:36] in some you know science journal to the [107:38] Game of Thrones coming out, we were [107:40] like, "We can get this genome done. [107:42] Surely they'll be they'll want our paper [107:44] because then they can have some press [107:46] attention to the dire paper." We never [107:48] got the DNA finished in time to do that. [107:50] It was the so poorly preserved. They [107:53] lived in warmer parts of the world and [107:55] so it was really hard to find samples [107:56] that had high quality DNA to be able to [107:59] get. It was a fun project though. [108:00] >> Were the babies cute? [108:02] >> Yes. [108:02] >> Yeah. Okay. [laughter] They didn't come [108:03] out ferocious. Yeah. No, they were [108:06] putting a plug in for them. Wolf here. [108:09] Extremely adorable. [108:10] >> Yes, I bet. Everyone loves a baby [108:12] animal. [108:13] >> Well, that's how we got dogs. I'm pretty [108:14] sure they were hanging around outside [108:16] cleaning up after us. Um, giving us a [108:19] little bit of advantage cuz if something [108:20] scary came like a giant cave bear or [108:22] something, they would howl and we would [108:24] our ancestors would know. But I'm pretty [108:26] sure that that was just commensal. We [108:27] could have lived for a long time with [108:29] them living around us and us living [108:31] around them. [108:32] >> But I think their puppies were cute. [108:34] Yeah, you make a really good point. I [108:35] mean, you know, this notion like the the [108:37] eyes of the getting rounder like in the [108:40] in dog breeds, you know, because people [108:42] like them. I mean, all the doodle [108:43] breeds, the hypoallergenic breeds, they [108:45] don't have fur. [108:46] >> I think about that sometimes cuz I have [108:47] two Labradors and so my house is [108:49] permanently coated in at least one layer [108:51] of dog shed hair fur. [laughter] [108:55] We're so comfortable as humans to uh [108:58] modify species for our immediate [109:00] convenience, but sometimes that's [109:02] obviously detrimental to entire [109:04] populations. You're talking about [109:05] reintroducing uh species that have not [109:07] been there in a long time or or [109:09] expanding their numbers. I would like to [109:10] think that with AI or other modeling [109:15] tools that you could make predictions, [109:18] not perfect, but better predictions [109:20] about, okay, let's model in the mosquito [109:22] population, the where the swamps are, [109:25] what the seasons are like, what the qual [109:28] population looks like, and you could put [109:30] you can model as many things that you're [109:31] aware of. [109:33] There's no graduate student, no matter [109:35] how brilliant, or professor, no matter [109:37] how brilliant, that can mathematically [109:39] model all the different influences of [109:41] all these different plant and animal [109:42] species. But my but AI can run it 24 [109:45] hours a day, 7 days a week. [109:46] >> This idea of digital twins, can we [109:48] create a digital twin of an ecosystem [109:50] and then perturb it in lots of different [109:51] ways and see what happens. I think this [109:54] is totally within the realm of [109:55] feasibility. It's big foundational model [109:57] but I I know there are groups of people [109:59] who are working on this for for smaller [110:00] systems like individuals to think about [110:02] human medicine how what happens in this [110:05] system this particular organ system if [110:07] you perturb it in this way and using AI [110:10] to be able to narrow down the window of [110:13] what edits might be reasonable to make [110:15] and what might others I mean we're doing [110:16] other things we have a completely [110:18] independent group of people that make [110:19] what we're calling our care reports [110:21] which are deep dives into the ecosystems [110:24] where we would [110:25] releasing any future deextinct animal. [110:28] We we release these when we have them [110:30] with the blue buck. We have a blue buck [110:32] care report that people can read to [110:33] figure out what we've thought about in [110:36] terms of the impact to the ecosystem [110:38] over short, medium, and long term. And [110:39] it involves conversations with local [110:41] stakeholders and conservation biologists [110:44] and people who are thinking about it [110:45] from all sorts of different [110:46] perspectives. So, it's absolutely, as [110:49] you say, critically important to think [110:51] hard before doing things, [110:53] >> but also be willing eventually after you [110:55] understand as best you can what that [110:57] risk was. [110:58] >> Yeah. Along those lines, I predict in [111:01] probably 3 to 5 years, not 10, the [111:04] technology that we were talking about [111:06] earlier of of mutating the HIV receptor, [111:08] that sort of thing will be very common [111:11] place in the context of fertility. I [111:13] mean, if we knew a certain constellation [111:15] of disease genes inevitably led to a [111:18] disease or a high probability of disease [111:20] and there was a a way to use gene [111:22] editing to rule those out once that had [111:24] been established a number of times, I'm [111:26] willing to bet even outside the Bay Area [111:28] that people would want that. No, nobody [111:30] wants a a harder life for their child, [111:32] >> right? You know, it could also come I I [111:34] I've thought about this when my my last [111:36] book is called Life as We Made It. And [111:38] it's all about how we've been messing [111:40] with the species that we encounter for [111:41] as long as we exist. In the last [111:42] chapter, I think about how we might turn [111:45] our editing technology on ourselves. Um, [111:48] really asking the question, what is it [111:49] that will push us over that edge? Right? [111:52] >> One of the possible scenarios is that we [111:54] have a, you know, a pandemic, a crisis, [111:56] and we learn that there are certain [111:59] people who have a particular genetic [112:01] variant that means that they will die. [112:03] And suddenly the most morally [112:05] reprehensible thing that we could [112:07] imagine doing becomes the actual only [112:10] ethical solution. And that is the thing [112:12] that pushes us over the edge. [112:14] >> You mean so you're talking about more [112:15] people dying or rescuing that through a [112:18] through gene editing [112:18] >> gene editing ourselves. Yeah. [112:20] >> And now we're talking more about public [112:22] perception scientists and implementation [112:24] and and where those intersect. And I [112:26] think that one thing that I've learned [112:28] is that a lot of it is about the [112:30] delivery method. So when we hear about [112:32] gene editing and you're taking a cell [112:34] and you're putting in a dish and you're [112:35] or even Ixie what you described before [112:37] like you know um the in in a dish of you [112:40] basically injecting a sperm cell into a [112:43] into an egg as opposed to running a [112:44] sperm race right people are a little [112:45] more comfortable with that than they are [112:47] like the Ixie it's like this one we're [112:49] taking this one already because you're [112:50] biasing an outcome in a strong way right [112:53] you're not letting the system decide [112:54] >> but people are okay with this if for [112:57] example you have a man with a very low [113:00] sperm count or with very few healthy [113:01] sperm where you can take a healthy sperm [113:03] and put it in the egg. [113:05] >> Yeah. No, I think people are comfortable [113:06] with it now because it's been around for [113:08] a while. [113:09] >> It's this every new technology you have [113:11] your first is it scary like why do I [113:13] hate this before? Let me be curious. [113:15] >> Yeah. I mean in a in a different [113:16] conversation but one that is relevant. [113:18] You know, it's fortunately we're not [113:20] talking about it today, but you know, I [113:21] get asked about peptides like every 5 [113:23] minutes these days. And not the peptides [113:25] of the GLP sort, but what's happened in [113:28] the health space is that the GLP drugs [113:31] have dstigmatized and taken away needle [113:33] phobia by putting the it's still a [113:36] needle, but it's on a pen. And so now [113:38] people are like, "Which peptide should I [113:39] take?" I'm like, "How do you get it?" No [113:41] one's saying like, "Is there a capsule [113:42] version anymore?" That was a big thing, [113:44] right? And now if you're like because it [113:46] turns out it's the hypodermic part, not [113:47] the needle that freaks people out. The [113:49] needle kind of freaks people out, but [113:51] people have no problem taking a pen and [113:52] going but they don't like using a [113:54] plunger and a needle, right? So now [113:56] people needle phobia has plummeted and [113:59] people are willing to explore things [114:00] that some of which there's good data on, [114:02] some of which there's like no data and [114:05] people are pinning themselves all over [114:06] the country, right? And so it turns out [114:08] that something this couldn't have been [114:10] predicted that there was this other [114:12] thing that was getting in the way. It [114:13] wasn't really the thing about taking the [114:15] the peptide that may or may not have [114:17] enough data. There are a lot of data on [114:19] the GLPS, but it really was the delivery [114:22] method. We saw this with computers, [114:24] right? They were big clunky things. You [114:25] had everyone had to use the same one. [114:27] Then all of a sudden, you turn it into a [114:28] phone that's also a camera and the next [114:29] thing you know, you kind of forget that [114:31] it's a computer, right? [114:32] >> Same thing with brain machine interface. [114:33] As long as people think you need to [114:34] drill into the skull or put something a [114:36] wire behind the ear, pretty soon this [114:38] will be non-invasive, [114:39] >> right? And then people aren't thinking [114:41] about, oh, it's going to control my [114:42] brain. So the big fear wall tends to [114:46] come down to zero through these things [114:48] that are hard to predict. And it's often [114:51] a combination of the messaging and kind [114:54] like like maybe everyone should pet a [114:56] dire wolf just once, just a little bit. [114:59] >> Would you would you like to pet a dire? [115:00] >> I would love to pet a dire especially [115:01] the little ones. But you know, [115:02] >> you should come visit us in the lab and [115:04] you'll see some of the really cool stuff [115:05] we're doing. The artificial wombs, our [115:07] really cool artificial eggs. You know, [115:09] there's a [115:09] >> you have artificial wombs. [115:11] >> We have one of [115:12] >> I realize this is going to terrify [115:13] people. I'm a biologist, but Okay, so [115:14] describe to me an artificial womb and [115:16] what that looks like. [115:17] >> Right now, we're thinking about about [115:18] mice, right? So, the idea is if we're [115:21] going to have hundreds of mammoths, [115:24] we're not going to get there by having a [115:26] hundred Asian elephants pregnant for 22 [115:29] months with with mammoths. We need a way [115:31] to be able to birth multiple mammoths [115:34] simultaneously without using elephants. [115:36] Elephants should be allowed to make [115:38] elephants, right? [115:39] >> And so we'll need to build the [115:41] technology to do this. But building that [115:43] technology is also an opportunity to [115:45] build technology that can really help [115:48] people and can help other species, but [115:51] really thinking mostly about people. I [115:53] have a friend who was diagnosed with [115:55] breast cancer during her pregnancy and [115:57] she had to make a decision about not [115:59] starting the therapy until she gave [116:01] birth or taking a giant risk with the [116:03] baby. What if we could just take the [116:05] baby out and be able to put it in a [116:07] place and have it completely develop and [116:09] then she could start the treatment a [116:11] couple of months earlier? Or if a baby [116:13] needs surgery, but you can't really do [116:14] it inside, have a safe way to have that [116:17] baby come out. These are all [116:19] technologies that are will be feasible [116:21] in the future that are motivated by [116:23] deextinction. How crazy is that? [116:25] >> It is wild. One one of the most [116:27] incredible things that I've witnessed is [116:30] a a niku. It's a different form of what [116:32] you're describing, but it's incredible. [116:34] Like you go in these places and it's [116:36] room upon room and it's super quiet and [116:38] you know they try and keep it dark and [116:39] there I mean like these are artificial [116:42] wombs so to speak, right? These are so [116:44] preey babies and some of which are very [116:46] preey. Some have issues and some don't. [116:48] Some are just early which is an issue of [116:50] its own own kind. But the niku [116:53] technology has come a long long way. [116:55] It's you know far from perfect but [116:57] that's essentially what you're talking [116:58] about right? [116:59] >> Yes. a more sophisticated NICU where the [117:03] we've learned so much more because of [117:05] the complimentarity of understanding how [117:09] genes map to phenotypes and being able [117:12] to use all of the genetic resources that [117:14] are available to us from all of the [117:16] people and learning about epigenetics [117:18] and building this technology that builds [117:20] on what we understand about the [117:22] developmental process. I mean, it's a we [117:24] are facing a future that I think is [117:26] really exciting and spectacular, maybe a [117:29] little bit scary, but I think as long as [117:30] we keep talking about it and having [117:32] conversations about it way before it's [117:33] possible, we can get to a place that [117:36] people are comfortable with and people [117:37] are excited about. [117:38] >> There seems to be a theme lately in my [117:40] life where people come on this podcast [117:41] and they're talking about [117:42] revolutionizing education. We had [117:44] someone uh the principal of Alpha School [117:46] come on here. Kids spend two hours a day [117:48] on their iPad learning from an AI tutor [117:51] that knows exactly what they need to [117:53] fill every gap in their knowledge. [117:54] >> Cool. I need that [117:55] >> two hours a day. Then they go like learn [117:57] how to farm, start businesses. It was [117:59] interesting that public reaction is very [118:01] divided on that. People say great and [118:03] then other people say, "Oh yeah, but it [118:04] costs a lot so it's only for rich kids." [118:06] And it turns out they're starting [118:07] scholarship programs. And but the idea [118:09] there is to figure out the best way to [118:12] educate humans and then wick it out to [118:14] everybody. But so but there has to be [118:16] this pioneering spirit and that's always [118:18] going to stimulate concern and there's [118:20] going to be the halves and have nots [118:21] things in people's minds. I think about [118:23] your work in in a different but similar [118:25] vein where being a pioneer is hard [118:29] because you have to tolerate people [118:31] saying and and a lot sometimes the [118:33] assumption that oh you're doing this [118:35] just for your own self-interest. It's [118:36] all financially driven and what about [118:38] the you know what about the starings [118:40] that you know need our help right now. [118:42] There's always this like what about the [118:43] things that need our help right now. Why [118:45] are we doing this? And I don't have any [118:47] great solutions uh for you on [laughter] [118:49] this, but I think that public education [118:51] is clearly a big part of it. And I think [118:53] the humanizing it at the level of who's [118:55] doing it. Like it's very clear that you [118:57] love biology. It's very clear that you [119:00] like hard problems in biology. And it's [119:03] very clear that if I may, it it seems [119:05] like you ra you're not afraid of but you [119:08] rather enjoy the the fantasy positive [119:10] outcome part of it. It's not all doom [119:12] and gloom. I mean this is similar. This [119:15] example works for me. Hopefully it works [119:17] for you. You know, like Elon wants to go [119:18] to Mars and I have guests on the podcast [119:21] that say like no, he should be curing [119:23] humanity here. And and I I told that [119:26] person that's like telling you know the [119:28] Metallica they should be the Grateful [119:30] Dead. They we need individuals who are [119:32] thinking in a different way steeped in [119:34] really good ethics and are excited about [119:37] the problem to evolve this thing that we [119:38] call life on earth. [119:40] >> Sure. And I'm I'm good with that if [119:41] people say to me, "Oh, why are you [119:43] working on this? You should be curing [119:45] cancer." Those are two different [119:46] although you know there's things you [119:48] know what quit this I don't know you but [119:50] quit this and go cure cancer. Well, I [119:53] mean, we are learning things from [119:54] elephants, for example, that we have to [119:56] know about and that is actually relevant [119:57] to curing cancer, but that's not our [119:59] main I'm not focusing on curing cancer. [120:01] But people who say you should do this [120:03] instead of saving living species, I I [120:05] just really have to push back on that. [120:07] We are doing both. There is not enough [120:10] money in conservation. There just isn't. [120:13] The idea that we're developing tools [120:14] that are immediately applicable to [120:16] existing conservation problems using new [120:20] funding, new resources, bringing in new [120:22] investment ideas, excitement, [120:24] enthusiasm, excitement from students. I [120:27] mean, why why is this not embraced? Why [120:29] is it always the well, you must not be [120:31] doing that, right? [120:32] >> We are doing that. the direwolves. When [120:34] we announced the direwolves, we [120:35] announced that we had cloned red wolves, [120:38] which is the most endangered species of [120:40] wolf in North American, endemic wolf [120:42] that again is living in a very small [120:44] population, captive breeding in the [120:46] Carolinas. We had colleagues Bridget von [120:48] Halt um who works at who's at Princeton, [120:51] who had discovered a population of [120:53] coyoteike animals that have a bunch of [120:55] redwolf ancestry, some on the order of [120:57] more than 75% redwolf ancestry. And so [121:00] we've cloned these wolves as a means to [121:03] introduce new red wolf genetic diversity [121:05] into the existing red wolf population [121:08] using the same toolkit that we used to [121:10] be able to clone and generate our [121:12] direwolves. [121:13] Have you heard about our red wolves? [121:15] >> No. They were announced at the same time [121:17] though. So all these people who are like [121:19] you should be doing this instead of [121:20] this, pay attention. We are. [121:23] >> They saved the ginger wolves. I love it. [121:26] Yeah. There's something that I think [121:27] people need to understand about [121:29] scientists and probably technologists [121:31] too but that's not my uh area which is [121:34] the person matters like the person doing [121:36] the work has to be really really drawn [121:39] to almost obsessed with the project [121:42] because you could sort of ask like for [121:44] any scientist there are a lot of [121:45] scientists working on kind of pedestrian [121:47] stuff in my opinion used to review a lot [121:49] of grants for NIH and you go like eh [121:50] sometimes those will get funded [121:52] sometimes not but but that's the kind of [121:54] science that certain people do they want [121:56] to turn a crank and then there are [121:58] certain scientists who really want to be [122:00] out on that like really cutting edge and [122:02] they have to be obsessed with the [122:04] question otherwise you get nothing in [122:05] the same way that I think Elon's pretty [122:07] obsessed I don't know him but with this [122:09] going to Mars thing and I don't think he [122:11] he's got a bunch of other stuff going on [122:13] clearly but you can't really draw him [122:14] off target by saying hey why why aren't [122:16] you working on curing cancer or building [122:18] I guess he is building flying cars so [122:20] the example of musicians to me just [122:22] works like you you can't get Metallica [122:25] to play the Grateful Dead happily. [122:27] They're just not going to do it. It's [122:29] not in their spirit. It's not in their [122:30] their soul to do it that way. And so I [122:33] think that like we have to accept this [122:35] about people and the people who move [122:38] things forward. Like Howard Hughes, the [122:39] very Howard Hughes, right? He liked his [122:41] aircraft, right? He liked you. You can't [122:43] convince people like, "Oh, you should be [122:44] saving the coral reefs." Someone else [122:46] should be saving the coral reefs, but [122:48] they need to be obsessed with coral [122:49] reefs. I mean, I'm stating the obvious, [122:51] but I think from the inside I relate. [122:54] >> Yeah. Also, people shouldn't [122:55] [clears throat] feel bad about not being [122:56] able to do everything. If you think [122:57] about the amount of time that you have [122:59] in your life, if you try to do 10 things [123:02] instead of one thing, you're going to [123:03] get way less done. You're not going to [123:05] make an impact. So, [123:06] >> it's so interesting. People love to tell [123:07] other people what to do. But I will say [123:11] there are people out there, I know this [123:13] because of this podcast, there are [123:15] people out there who are enchanted by [123:17] biology, that are enchanted by what [123:19] you've told us today, that are excited [123:21] about these species and can imagine the [123:24] positive outcome. And some of them are [123:26] young and some of them are old, but God [123:28] bless the young ones because they're the [123:29] ones it only takes a few of them in a [123:31] certain area of science to really move [123:32] things forward as you know. So, where [123:35] are the public education efforts outside [123:37] of podcasting and whatnot? Like, how [123:39] many people are at Colossal? [123:40] >> There are about um 120 scientists and [123:43] then there's, you know, other other [123:45] people involved. We have a huge social [123:46] media team who put a lot of science bits [123:49] out for the world targeting different [123:51] audiences with different types of [123:53] information. We work with a lot of [123:55] podcasters and we work with other teams [123:58] of people making documentaries and [123:59] films. We publish papers using the [124:02] traditional old school peer review [124:04] process. We post some papers on the [124:06] archive if we think it's important to [124:08] get the information out faster before [124:10] peer review. So, we're trying lots of [124:13] different methods of communicating. And [124:14] of course, I go out and talk to people [124:16] and I'm a National Geographic explorer. [124:19] So, I do I take part in the National [124:20] Geographic live series. So I've gone and [124:22] just talked to communities about, [124:24] >> you know, conservation and genetic [124:26] rescue and deextinction and a future [124:28] that can be both biodiverse and filled [124:30] with people. [124:31] >> So in junior high, high school, graduate [124:33] school, were you sitting there thinking, [124:35] I'm in a department of zoology at Oxford [124:38] University, and there's a picture of [124:40] some old dude on the wall, this is what [124:41] how I felt when I went to Cambridge. I'm [124:43] like, that's Darwin's house or like [124:46] there are two ways to be in that kind of [124:48] environment. like whoa that that's so [124:51] and so and there's this history or was [124:53] it we can do this all much much better [124:55] because I get the sense that you like to [124:57] break the mold but I don't want to kind [124:59] of lead the witness here. So what were [125:00] you like as a kid and in graduate [125:02] school? Were you thinking, you know, [125:03] this this field, this whole zoologology [125:06] thing feels kind of steeped in old stuff [125:08] and I want to break it open or Yeah. [125:12] [clears throat] Like maybe just tell us [125:13] a little bit about your mindset in in uh [125:15] these kinds of [125:16] >> my origin story. I think I always [125:18] disappoint people with my science origin [125:20] story. I went to the University of [125:22] Georgia as a broadcast journalism major. [125:24] I had worked for the local TV station in [125:27] the corner of Northwest Georgia where I [125:29] grew up. I was on air [125:31] >> in the mornings. I did local cutins on [125:33] headline news at 24 and 54 after the [125:35] hour. When I went to the University of [125:37] Georgia, I was actually the news [125:38] director of a local radio station that [125:40] was there, which was not particularly [125:42] well aligned with being a freshman at [125:44] the University of Georgia. We'll just [125:46] say I was living in a dorm that had a [125:48] shared bathroom and we would I had to be [125:49] at work at 4:00 in the morning to write [125:51] and cut the news so I could be on the [125:53] drive time show. Do you remember these [125:54] from the '9s? Like the [125:56] >> Yeah. So, I had an opportunity to take a [125:58] class after my freshman year and it was [126:02] an honors program class and it was [126:04] geology and archaeology and it was a [126:09] nine-week class and we started off on [126:10] the east coast and learned about [126:13] minerals, identifying minerals and and [126:15] the sort of coastal dynamics on the [126:16] coast. drove across the country, [126:18] sleeping in national parks, drove up the [126:20] west coast, drove back across the [126:21] country and learned about the formation [126:24] of the national parks, the landscape [126:27] that is the US, right? And I thought to [126:30] myself as I was watching this, you could [126:32] see the scars on the landscape from [126:33] glaciers and we went to all of these [126:37] archaeological sites and anthropological [126:39] sites and saw the impact of people on [126:41] the ecosystem and the impact that we had [126:43] on those people. And I thought, this is [126:46] the kind of story that I want to tell. [126:47] Maybe I want to be a science journalist [126:49] instead of just a regular journalist. [126:52] The idiocy of people who think they're [126:53] an expert because they've done something [126:55] for a few years. I was like, I already [126:56] know how to be a journalist. I'll just [126:57] learn how to be a scientist, right? And [126:59] so I started taking science classes. I [127:02] ended up going to Panama, living on a [127:04] place called Barrow, Colorado Island, [127:06] and studying parasettoid wasps and [127:09] wasn't doing anything related to [127:10] genetics or really evolution. and it was [127:12] ecology, population ecology. And I met [127:15] somebody there who was starting up a lab [127:17] in Edinburgh. And [snorts] I thought he [127:20] was really smart and interesting. We put [127:22] together this proposal of a a project [127:24] that I could do as a PhD student where [127:26] we were going to study the type of wasp [127:28] that switches back and forth between [127:29] inbreeding and outbreeding. So the [127:31] question was, is the switch to [127:33] inbreeding something that is intended to [127:35] purge your genome of those delletterious [127:37] alals like the Channel Island foxes? [127:39] like if we inbreed, we'll get rid of all [127:41] that bad stuff that's accumulated. Then [127:42] we can go back to outreing. [127:44] >> It's a pressure test. [127:45] >> Yeah. So, we designed this experiment. I [127:47] went back to the University of Georgia. [127:48] I was like, I'm going to go to [127:49] Edinburgh. This is going to be great. [127:50] Help me apply for these scholarships. [127:52] And they said, cool. Because I couldn't [127:53] afford to go, you know, overseas for [127:55] grad school. And I said, cool. You can [127:57] you can apply, but you have to apply for [127:59] all of the scholarships that we have for [128:00] our honors program people together [128:02] because it's just one big package. So, I [128:04] applied for the Marshall scholarship to [128:06] go to Edinburgh [128:07] >> and the roads. And I did not get a first [128:10] round interview for the Marshall. So [128:12] ended up not obviously being able to go [128:15] to Edinburgh, but I got a road [128:16] scholarship. So I ended up at Oxford. [128:18] >> So you are a true I think you're our [128:19] first road scholar, you know. [laughter] [128:22] >> So I got a roads I ended up at Oxford. I [128:24] had no idea what I wanted to do or who I [128:27] was going to work with. And I met on my [128:30] first few days there this guy called [128:32] Alan Cooper who was a Kiwi. He was [128:34] setting up an ancient DNA lab. This was [128:37] one of the few labs at the time that was [128:38] going to be built to be able to process [128:41] these old samples. And I was really [128:45] excited about the idea of ancient DNA [128:47] because it brought together geology and [128:50] paleontology and storytelling. If I'm [128:53] reading DNA sequences from entire [128:55] ecosystems that used to be alive, I can [128:58] tell a story about how the environment [129:00] changed when people first arrived or or [129:02] how the environment changed with rapid [129:04] warming out of the last ice age. And I [129:07] was like, "This is the science I want to [129:08] do." Plus, it was brand new. Nobody was [129:10] doing it. There were a couple of [129:11] dinosaur DNA papers that had been [129:13] published and proven to be false. And it [129:15] was really an opportunity to bring stuff [129:17] together that hadn't been done before [129:19] and just do something entirely new. and [129:21] he told me that if I joined his lab I [129:23] could go to Siberia and that was enough [129:24] for me. I signed on the line. I was like [129:26] I'm in. So that's my origin story and I [129:28] think it is because it was new because [129:31] it was an opportunity to bring together [129:33] lots of different disciplines that you [129:37] know otherwise really hadn't been [129:38] thought of together. I got into [129:40] deextinction because everyone who works [129:43] in ancient DNA is asked as the first [129:45] question whenever they publish a paper. [129:49] This is you're working in ancient DNA. [129:51] We're doing stuff that's high-profile. [129:53] We get high-profile papers. It's it's [129:55] normal in science for this thing to [129:57] happen. You get interviewed by somebody [129:58] from the media and the first thing they [129:59] want to know is, "So, what does this [130:01] mean about how close we are to bringing [130:03] dinosaurs back to life?" Every time. [130:05] Every time. [130:06] >> I'm more concerned about the blackfooted [130:07] ferrets. Frankly, [laughter] [130:09] >> when I was researching my my second [130:11] book, I was using the New York Times [130:13] Wayback Machine, which is amazing. Love [130:15] the Wayback Machine. And [snorts] I was [130:18] reading the very first article about the [130:20] very first ancient DNA publication in [130:23] 1984. Researchers from Berkeley in what [130:26] was called the extinct species study [130:28] group had managed to isolate using [130:30] molecular cloning because this was precr [130:32] days [130:33] >> a tiny little fragment of DNA from the [130:36] skin of a preserved quaga which is an [130:38] extinct type of zebra [130:40] >> and show that it was related to a zebra. [130:43] So the scientific finding was not that [130:45] illuminating, but the fact that DNA [130:47] survived after death, this was the first [130:50] discovery of that. So it was a big deal. [130:52] It really set off all of the the stuff [130:54] that became the dinosaur DNA days of [130:56] ancient DNA. The [130:58] >> lead to forensics in [130:59] >> all of the forensic stuff. Yeah. All [131:01] that came came out of this, too. But [131:03] when the journalist interviewed Alan [131:05] Wilson as the very first ancient DNA [131:07] researcher, publishing the very first [131:09] ancient DNA paper, he got to be the [131:11] first person to ask [131:12] >> the dinosaur question. [131:13] >> The dinosaur question. Yes. [131:15] >> I mean, it is true that if you walk into [131:16] the life sciences building at Berkeley, [131:18] there's a T- fullsize T-Rex skeleton [131:20] there. It's very cool. People love the [131:22] I've never been dinosaur obsessed. I I [131:25] can think of many more animals and human [131:27] diseases that to me are more [131:28] interesting, but this is like the why [131:29] don't you cure cancer thing. So, [131:31] >> yes. Well, but I think we get to mammoth [131:33] because as soon as people hear that and [131:35] understand that we can't have dinosaurs [131:37] because there's no dinosaur DNA, they [131:39] they tend to settle on mammoth. Either [131:40] mammoth or saber-tooth cat. Those are [131:42] the two things that that we get after [131:44] that. But I think it's just because [131:45] they're big, you know, it's it's this [131:47] big thing. We know they're extinct [131:49] because our ancestors hunted them. [131:51] >> We know they're relatively recent. We [131:53] can imagine what they looked like. [131:54] They're in popular culture a bit. And so [131:57] it's a matter of of awe of interest. I [131:59] think it's the size and scope that is uh [132:02] they make us feel small and [132:04] >> people don't like to feel small but [132:06] mammoths make us feel small too I think [132:07] but in a way that we we can appreciate [132:10] >> yeah there's something about the [132:11] psychology around this in terms of [132:13] public perception and the dinosaur thing [132:14] I'm going to go with that people want [132:16] the best for our species and other [132:18] species on average they're a little [132:20] scared based on for reasons that make [132:22] perfect sense to me based on what they [132:24] know and and what they don't know for [132:26] that reason and many other reasons I'm [132:28] just grateful that you'd come out here [132:29] and talk about this stuff today and that [132:31] you're doing what you do. I thought the [132:32] direwolf thing was super cool. I still [132:35] do. [132:35] >> You should come see them. [132:37] >> I got it. I'm not saying that I'm, you [132:38] know, I, as a biologist, I got it. As a, [132:41] you know, developmental biology, I was [132:42] like, I got it. This is not like taking [132:44] some human cells from the cortex and [132:46] putting them into a mouse cortex. Like [132:48] those are cutesy experiments. Frankly, I [132:50] thought those experiments were more like [132:52] cutesy derivative. They didn't really [132:54] inform or anything in my opinion. But [132:56] what you guys did, I thought was really [132:58] cool. And then as I started learning [133:00] more about what you're trying to [133:01] accomplish, like repair ecosystems, make [133:03] better ecosystems, I'm all for progress. [133:06] So, thank you for doing what you do, for [133:08] continuing to do what you do. I didn't [133:10] even get into the fact that you walked [133:12] away from a fully thriving lab in [133:15] academia, Howard News Investigator, [133:16] which is this thing that very few [133:19] attain. and so to do this. So clearly [133:21] you're on a mission and I I have every [133:23] anticipation that it's going to work out [133:24] and work out for the best for animals [133:26] and for people. I'm excited to see what [133:28] you guys do. [133:29] >> Thank you for the opportunity [133:30] [clears throat] to have this [133:31] conversation. [133:31] >> Yeah, it's a lot of fun for me. I rarely [133:34] can I talk about ferrets, woolly [133:35] mammoths, dinosaurs, and uh human gene [133:38] editing all in one conversation. Thanks [133:40] so much. [133:41] >> Thank you. [133:41] >> Appreciate you. Thank you for joining me [133:43] for today's discussion with Dr. Beth [133:45] Shapiro. To learn more about her work, [133:47] please see the links in the show notes [133:48] caption. 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